Siniperca chuatsi (mandarin fish): 122879070
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Entry
122879070 CDS
T08948
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122879070 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122879070 (exosc5)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122879070 (exosc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
122879070
NCBI-ProteinID:
XP_044058680
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All DBs
Position
LG7:26822071..26826247
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AA seq
219 aa
AA seq
DB search
MEVCDSSNVSLREFGCEQSLLSRPDGSASFVQGDTSVLAGVYGPAEVKVSKEIYDRATLE
VLVQPKVGLPSVRERSQEQCVRETCEASLLMSLHPRSSLTLILQVLHDDGSLLSCSLNAA
CMALMDAGLPMSCLFCGVTCAIDTDGQIITDPTAAQEKESRALMTFAIDSTDRRVMMSLT
KGSFSVHELQQCIAVSQKASEKIFQFYRESVRRRYSKTL
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgtgcgactcttcaaatgtttccttgagagagtttggttgtgaacagagttta
ctgtctcgacctgacggttcagcgtccttcgtccaaggagacacaagtgtgttggccgga
gtgtacggaccagctgaggtcaaagtcagcaaggagatctatgaccgggcgacactggag
gtgttggtacagcccaaagtgggactgccaagtgtaagggagcgatcacaagagcaatgt
gtgcgagaaacctgtgaggcctctctgctcatgtcacttcatcctcgctcctccctcact
ctcattcttcaggtgttacatgatgatggttcactcttgtcctgctctttgaatgctgcc
tgtatggctcttatggatgcaggcctgcctatgagttgtctgttctgtggagtgacctgt
gccatcgacacggacggtcaaatcatcacagaccccactgcagctcaggaaaaggaaagt
cgagctttgatgacctttgctattgacagtacagaccgcagagtaatgatgtcgttaacc
aaaggatctttttcagttcatgagctgcagcagtgtatagcagtcagtcagaaagcatca
gagaagatcttccagttctacagagagtctgtcaggcggcgatactccaaaaccctctga
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