Siniperca chuatsi (mandarin fish): 122880814
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Entry
122880814 CDS
T08948
Symbol
si:ch73-43g23.1
Name
(RefSeq) serine/arginine repetitive matrix protein 2
Organism
schu
Siniperca chuatsi (mandarin fish)
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4585
SKN1_KRE6_Sbg1
Motif
Other DBs
NCBI-GeneID:
122880814
NCBI-ProteinID:
XP_044062231
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All DBs
Position
LG8:complement(19920860..19934500)
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AA seq
2747 aa
AA seq
DB search
MDSWTLQGDSYSFLRSAPHTFSLCRDGTPNHVEIFDIINVPSQRSAISETTCLCDIFGDD
CESPSLSSSPAVGAFVPSQREVDGTAAASSLVDDLNDSSGSYHTAQGSSEGEEGFEDSRE
RLYSPLLQSESSEKRQQEGKGLSSGHPEVSVDSSPNLEPKSKSPVPQLSTASPSSEVLNT
GERTPSPGHNSPYTLSPEGRASSLSSSSVEKRCSPSPSNPRETQSEAEPRRITPSFRDRH
NSPSLSLNPSPSPEPRNCVSSSSSESVNNQSLPEFRVAQVSPEPKSSYFDQHSSLSPEPT
SKDFSLDFTESSFESRAILSSPLPSSSSTELSSQSRETLVSPKLKNRSYSPHTPASSPFP
ELRRRVSLPDLFSRGSTPDIEDSTHTPELISDLSTAGRDTATTPASQDTRLSAESVSTVS
TPAPRYTPPSPVISIATSPELVERSVSPELRHTAPSPGLLSAASLAQIGTRTPSLGPSHK
IRDISTHTEIRTQVSSPVVSYSLSPSPGVTSNCSSIEHRHTAPSPEIRITASSPEVSRRE
QSSEVETISVSPLLEPHFDSASSRSLTSSPHITGISYSVVQPEDRDTPPFAELSRLSTPE
PCRTLVSPEARSPTPSRDGIQSSLAESTGTPQDSPHISGFKSSVLQPEITLPHQRRYQTP
SPRSKHYTPSPEPRYQTPSSDKYQSPSPQHRSKDPSPVAPSPEQRYHQHSSANLSIEYNS
QDTHLTPPLRNTCTAEVEGDSSSIDITEIQYPTHLEKESVSPSYELYSGDKSVVAQIKSR
SPVIAVPSPLSTSPFLAVKKVDSSLKQQSTEREATPKEASHQDNLSLTFSEEKQAISPTF
FHKEDPYNNPAIEIKSPSPNLLVSKNRSPNISLVHRDPSNSPLQSLDNPQPHFTTYSLTS
ESSSLKSGCTPEHARRQLSNSVRRENRERFTEDMAHHVNRRRTPSPPLTRFTPVHIIAPE
KPYRQWQNRSRSPSQVVTSSQSGNLKKVLTNKESPNVAPVDNNSQAHWVRLGTQLEMERE
MQLEEDREVGRDRQRDTEKERESKREERVPEKGKGWQGDASYRGEQVELSFNARNRKGPV
SCRTAPTSRETRQGLPTVHSYSESMLATRQLQQQQSLLRLASQQDNRGGGLSRRLQPPAP
QNKNSAPGRVAANRPCRSSSSSMGSELDEADNEVKWFTDSAFHSLSSPEVDYLDMYNSSH
RSSTNISQPSTQESPAGVNAAWLAYADFRGSAPKLDNDELSFQQPPAYYSDGLDPSRRYE
MGSFECVDVAMEREDSRMVRRGVPKRQIQLKRKSNAEGKQDESSENSSPGVPVMVESPSL
ESHSRETFVRQHSTPAAMQECYHSEPSPEPNQQNERKSKLQKSASLDETCTKTKMATCLI
KSVLSKKMQSVDKQPDEQAGEEVSPTFVENSPPTESAVATLNKSPKPDAHNLSSSLKSDY
SLSSEGLPVRGEPSTKEEAKPPKGFGVRSSNRPSSSSSSRSFNFSQTESEEVDFQSRNAT
LLRSEMRSELKVPFDSNQLRTGVQRADDSKAWDEREGGESANATAGNTGAPSATGASSMQ
ARMTNRDQECENTEDHKQLQQGEKGAYMSKTQEIKLKAVEKKKAPLNVCLTPEAENKPEA
SSPDVSFREKEERVETSVDEKTEEEEGNGNNQVKVPIHKVRDVRRLVKNTYNLSFKATSA
VMPSNVNEERVENYNEEGREEIKEERREEVIVVEEREVRQEIRREERREEREEEFRVERK
EKQKEEIKDSKLLTLSPSLQGKGNPLSRPQPMQIEYKAVCWKEDKNKMSCSKTDSENPGE
KPQASPKLVTESSNANNTAISKPCQHDLNMAAKTQEAKTEMHKVPDNEDKPVVVRTDRKP
PMLGSLPKLPSKEREVSTAVVLIRDGSSRTKTCASPAQEEIPVPLQAPAASPSPGPTTPG
STPSSSGHSVSMLLKEKGYQADIGAVVGDNQNAAEGKGVPCKHVNCLEIPLQTTTPSDGG
RIESHRERTFSSLSTTSGPSAVSDNTDTLSKTREDEGVSIKPTVKDTAMQKSASLLRNTV
EQTPPPTKQKEIGDFEAVKRLDPSFPPRSPAMRRFRPQPIEVKSLSKETQKQEIPSNSTG
NNRPQTIEVKSIAKNSHKPAVPPKPSCKFKPADLGAMPSEAQRPSATTPTVKPQGEERPQ
TIVVSSPTIYRKISSESTSTSSYTRKLAVSAVSSLKPPPCKTTATTISNLSNQSTAPSET
EASNDRGRQQKPGASPQISSYTQRPTTLATAPTSATDPGLTSAPGPVSDPKANQVSGPVS
AGANQPSQPAVMDPDSQPQYSRMAYPHEQAMPVTSNNAKPPTAVSTTQVPGHTHQPCYRS
LSSERSQRTDLRFYASDDPPSYDERESFSPLMLPDLTPRRSNRYQPSSRPPPCSCTAGCP
SHPGLTPPHHHRSPHNPTPPAPPLSPGQALPYPVAQPPLRTHQCRPDPQPISYQPGSPKS
SPLGPSQPPAMYQPLHQPPPGPPHPSLMQACPADRSLQPPQHIDPRRPPVHRSPQQQPPG
MAGAPYNDPSHSHSPGLPPLDPQYLCGPQSLGPSYGSEYGGDSSSLYSESSYGQTPRRVL
LDPETGKYFYIEVPVQPLRKMLFDPETGQYVEVLIPQQAMSHSGLYPPSAAPYPSLHNPN
MYAPAPQYMPYAAPPPPAHPQAQPQPPRYPEASATATMHPSGPGVNYRNPSGQGSKPEPQ
NHPQLDQSYLESMYYVPTGMNASPNPTPPDYYHKHPPNLPPSGGERS
NT seq
8244 nt
NT seq
+upstream
nt +downstream
nt
atggacagctggactctccagggggacagctactctttcctgcgcagtgccccccacacc
ttttccctgtgccgtgacggtacccccaaccacgttgaaatcttcgatatcatcaacgtc
cctagtcagcgtagtgccatttccgagactacctgcctgtgtgacatttttggagacgac
tgtgagtcgccctccctctcaagcagccctgctgtaggggcttttgtcccttctcagagg
gaggtggacggaacagctgctgcatcatccctggtggatgatctgaacgactcctctggc
tcttaccacactgcacagggctccagtgaaggagaggagggctttgaagattcaagagaa
aggctttacagccccctgttgcagagtgagtcttcagagaagagacagcaggagggcaag
ggactgagctcagggcatccagaagtttctgtggacagtagcccaaatttagaaccaaaa
agcaaatcaccagtacctcagcttagtacagctagcccatcatctgaagtcctcaacact
ggtgagaggaccccctctcctggacataacagcccctataccctcagtccagagggaaga
gcatcatccttatcttcttcctcagttgaaaaaagatgttcaccatcaccatctaatcct
agagaaactcaatcagaagctgaaccaaggagaatcactcctagtttcagagatagacac
aacagcccctcactgtctttaaatccaagtccctcccctgagcctaggaactgtgtcagc
tcatcctcctctgaatcagtgaacaaccaatctttacctgagttcagggtagcacaagtc
tcacctgagccaaagagcagctactttgatcaacacagcagtctctcacctgagcccaca
tccaaagatttttctctagattttacagaatcatcctttgaatctagagccatcctttca
tctccattaccttcatccagtagtacggagttatcatcccagtcaagagaaacactggtc
tctcccaagctgaagaataggtcctactcacctcataccccagcatcatctccttttcct
gaactaagaaggagggtctccctgcctgatctcttcagcagaggctccacacctgatatt
gaagattctacccacacccctgagttgatttcagatctttccactgcaggaagagacacc
gcaactactcctgcgagccaagatacaaggttatcagctgaatctgtcagtactgtgtct
acacctgccccccgatacacacctccctcacctgtcatttcaatagcaacatctcctgag
cttgtggagaggagtgtctcacctgaattaagacacacagctccctcacctggcctgctc
agtgctgcctctctggctcagattgggacaagaactccctctcttggcccctcacataaa
ataagagacatttcaacacataccgaaatcaggacccaggtgtcttcacctgtggtaagt
tatagtttatctccatcacctggagttacgagcaactgctcttccattgagcacagacat
actgccccctcacctgaaatcaggattacagcatcctcacctgaggtcagtaggagagag
cagtcttctgaagtggagacaatatcagtctctcctctcctagagcctcactttgactct
gcctcatcaagaagcctcacttcgtcccctcatatcactgggatttcttactctgttgtt
cagcctgaggacagggacactcccccatttgctgagctctcacgtctctccacccctgag
ccttgtaggacacttgtgtctcctgaagcaaggagccctaccccaagcagagacggtata
caaagcagtttagcagagtccactggtacaccacaagactcacctcatatatcaggcttc
aaaagctctgtcttgcagcctgaaataactctgccgcatcaacgtagataccaaacacct
tcacctcggtcaaagcattacactccctcacctgagccaagatatcaaaccccttcatct
gacaagtatcaaagtccctcacctcagcatagaagtaaagatccatcacctgttgcccca
tctcctgagcagaggtaccatcaacattcatcagcaaacctctccatagagtacaactct
caagatacacatcttactcctcctctaagaaatacatgtacagctgaggttgagggggat
tcctcttcaattgatatcacagaaattcagtaccccacacatttggaaaaagagagtgtg
tcaccctcatatgaattatacagtggagacaaatcagttgtagctcaaatcaaaagcaga
tcaccagtgattgcagttccttcacctttatctacttcacctttcttagctgtcaaaaag
gtagacagttcactgaaacaacaaagcacagagagagaggcaacaccaaaggaagcaagc
catcaggataacttgagtttaaccttctctgaggaaaaacaagccattagccccaccttt
tttcataaagaagacccttataataatccagccattgaaatcaagtctccttcccctaat
cttctagtatctaagaacaggagtccaaacatttcacttgtccacagggatccatccaac
tcacctctgcagagtctggacaacccacagcctcacttcactacttattccctaacttct
gaaagcagctcattaaaatcaggttgcacacctgagcacgcaagaagacaattgtcaaac
agcgttagacgtgaaaacagagagaggttcacagaggacatggcccaccatgtaaacaga
aggcggactccctctccaccactcaccaggtttacacctgtccacatcatagcccctgag
aaaccatacagacagtggcagaacagaagccgtagcccctctcaggttgtaacatcttca
cagagtggtaatttaaagaaagtgttgacaaataaggaaagccccaatgttgctcctgtt
gacaataatagccaggcccactgggtcaggctaggaacgcaattggagatggagagggaa
atgcagctggaggaggatagagaggtaggtagggacaggcaaagggatacggagaaggag
agagagagtaagagggaggagcgggttcctgaaaaggggaaggggtggcagggggatgcc
agttacagaggggaacaggttgagctgtcattcaatgccaggaatagaaaagggccagtg
agttgcagaacagctcccacaagcagagagacccgccagggactgccaacagtgcattcc
tattcagagagcatgcttgccaccagacagctacagcaacaacagagtctgcttagactt
gcttcccaacaagacaacaggggtggtggtcttagcagacgacttcaacctcctgcgccc
cagaacaagaatagtgctcctggacgtgtggctgcaaacaggccctgccggagttccagc
tccagcatgggaagtgagcttgatgaggcagacaatgaggtgaagtggtttacagactct
gctttccacagcctctcaagccctgaggtagattatcttgacatgtacaactccagccac
cgttcatctaccaacatttctcaaccatctacccaggagagcccagctggggtcaatgcc
gcctggctggcctatgctgacttcaggggttctgctccaaagctggacaatgatgaactc
tccttccagcaaccacctgcatactactcagatggcctagatccatcaaggcgctatgag
atgggcagctttgagtgcgtagatgtcgccatggaaagagaggactccaggatggtgaga
agaggagtgccaaagagacagatccagctgaagagaaagagtaatgctgaagggaagcag
gatgagagcagtgaaaatagcagtcctggggtaccagtgatggtggaaagcccatctcta
gagagtcactccagagagacattcgtgagacaacacagtacaccagcagcaatgcaagaa
tgctaccattctgagcccagccctgagcccaatcaacagaatgaaagaaaatccaaactc
cagaaatctgcttctctggatgaaacatgcactaaaaccaagatggccacttgtctcatc
aagagtgtgttgtccaagaagatgcaaagtgttgataaacaacctgatgagcaggcagga
gaggaagtgagccccacttttgtggaaaacagcccaccaaccgagagtgcagtggcaaca
cttaataaatccccaaaacctgatgcacataatctgagttccagtcttaagtcagattat
agtctttcatctgaaggtcttcctgtgagaggagaaccaagcacaaaggaggaagccaaa
ccaccaaaaggttttggagtaagatcgagtaacaggccaagttcatccagcagcagcaga
agttttaacttttcacagactgagagtgaagaggttgattttcaaagcaggaatgcaact
ttattaagatctgaaatgagatctgaattgaaagtgccatttgatagtaaccagttaaga
actggagtacaacgagcagatgacagtaaagcatgggacgaaagggagggtggtgagtca
gcaaatgccactgccgggaacacaggggctccttctgccactggagccagcagcatgcag
gccaggatgacaaatagagaccaggaatgtgaaaacacagaggaccataaacaactccaa
cagggtgaaaagggtgcctacatgtcaaaaacacaggagattaaactcaaagccgtggag
aaaaagaaggcccccctaaatgtctgtctcacacctgaggcagaaaacaaacctgaggct
tcttcaccagatgtgtctttcagagaaaaggaggaaagggtagagaccagtgtagatgag
aaaacagaggaagaagaaggaaatgggaataatcaagttaaggtccccattcacaaagtt
agagatgtgaggcggcttgtaaaaaatacatataacctgtccttcaaggcaactagtgct
gtaatgccatcaaatgtaaatgaagaaagggtggaaaattataatgaggaagggagggaa
gaaataaaagaggaacggagggaagaggtcatagtagtggaggagagggaggtaaggcaa
gaaataaggagggaggagaggagggaagaaagggaagaggagttcagggtggagaggaaa
gagaaacagaaagaggagataaaagactcaaagctgctaaccttatctccatctcttcag
ggcaaaggaaatcctctgtctcgtccacagccaatgcaaatagaatacaaggctgtttgc
tggaaagaagacaaaaataaaatgtcatgcagcaagacagactcagagaacccaggtgaa
aaaccccaggcgtctccaaagcttgtcaccgagtcctcaaatgcaaacaacacagcaatt
tccaagccatgtcaacatgatctaaacatggcagcaaaaacacaagaggctaagacagaa
atgcataaagtgccagacaatgaggacaaacctgtggtggttagaacagacagaaaacct
cccatgctcggaagcctccccaaactgcccagtaaggaaagagaggtgtccactgctgta
gtgttaataagggatggatccagcaggaccaagacatgtgcatctccagcccaggaagag
attcccgtcccactccaagccccagctgcttcaccttcacctgggcccactacccctggt
agtacccctagtagcagtggccactcagtttccatgttattaaaggagaaaggctaccaa
gctgacattggagcagttgtgggtgacaaccaaaatgcagctgaaggtaaaggggttccc
tgtaagcatgtgaactgcctggagatcccccttcagaccaccactccttcagatggaggt
cgaatcgagtctcatagagagagaacattctcttctttatccaccacgtcaggcccctca
gcagtgtctgacaacacagacaccctttcaaagaccagagaagatgagggagttagcatt
aagcctaccgtaaaagacacagcaatgcaaaaaagtgcttctctgctaaggaatacggtg
gagcaaacgccacctcctacaaaacagaaggaaataggagattttgaagcagtgaaaaga
ctagatccatcttttcccccaaggtcccctgcaatgaggagattcagaccacagccaatt
gaggttaagtcactgtctaaagaaacacagaaacaagagataccctcaaactctacagga
aacaacaggcctcaaaccattgaagttaaatctatagctaaaaattctcataagccagct
gtgcctccaaaaccaagctgcaaatttaaacctgcagatttaggagcaatgccaagtgaa
gcacagagaccatcagcaacaacaccaactgtaaaaccacaaggtgaggagaggcctcaa
acaattgtagtgtcctcaccgacaatatatagaaagatctccagtgagtccacatcaaca
tcaagctatacaagaaaactagctgtgtctgcagtatccagcctcaaacctccaccatgc
aaaacaacagcaaccaccatctccaatctctcaaaccagtcaacagcaccatcagagaca
gaggcatctaatgacagaggtcggcagcaaaagccaggggcctcgcctcagatctctagt
tatacacaaagacccacaaccttagctacagctccaacatcagccactgacccaggttta
acctcagctccaggtccagtttctgacccaaaagcaaaccaagtctctggacctgtctca
gctggagccaaccagccaagccagccagctgttatggatccagacagccaaccacagtat
tctaggatggcataccctcatgagcaagcaatgccggtaacttcaaacaatgcaaaacca
cccactgctgtttccacaacacaagtgccaggacacacacaccagccatgctacagatca
ctctccagcgagcgctctcaaagaacagatctgcgtttttatgcctcagatgaccctcca
agctacgatgaaagagaaagcttcagtcccctcatgctcccagatctgacccccaggagg
tcaaatcgctatcaaccctcctcccgccctcctccctgctcctgcacagctggctgccct
tcccaccctggtctcacccctcctcaccatcaccgcagcccacataaccccaccccccct
gcccctccactctctccaggacaggcattaccttacccagtggctcagccccctcttcgt
acccaccagtgcagacctgaccctcagccaattagctaccagcctggctctcccaaatca
agtcctcttggtccaagccagccaccggccatgtaccagcctctccaccagcctcctccc
ggccctccccacccctcactcatgcaggcctgccctgctgaccgatcgttgcagccaccc
cagcatattgaccctcgacgaccccctgtccacagatccccccagcaacagccaccaggc
atggctggggctccttacaatgatcctagccacagccactctcctggccttcctcctttg
gatccccagtacctgtgtggccctcaaagcctggggccttcctatggctctgaatatggg
ggtgacagctccagtttgtactcagagagtagctatggacagacacctcgcagagtgctc
ctggatcctgagacagggaagtatttttatatcgaggtgcctgtacagccactgagaaaa
atgctgtttgacccagagactggccaatatgtggaagtgctcatcccacaacaagcaatg
tcacattcaggcctgtatcctccttcagcagccccctacccatctctccacaaccccaac
atgtacgcccctgctccacagtacatgccctatgcagctcctcctcctccagcccacccc
caagcacagccccagccaccccgatatcctgaggcctctgccacagcaacaatgcaccca
agcgggcctggggtcaactacaggaatccttctggtcaggggtccaagccagagccccag
aaccatccacaactggaccagagctacctggagagtatgtattatgtccctacagggatg
aatgcaagccccaatcccaccccaccagactattaccacaaacatcccccgaacctaccc
ccatcagggggggaaaggtcctga
DBGET
integrated database retrieval system
