Siniperca chuatsi (mandarin fish): 122886947
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Entry
122886947 CDS
T08948
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04510
Focal adhesion
schu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122886947 (lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122886947 (lamc1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
Laminin_EGF
Laminin_B
Alanine_zipper
Death
DUF6061
Motif
Other DBs
NCBI-GeneID:
122886947
NCBI-ProteinID:
XP_044075619
LinkDB
All DBs
Position
LG13:1564084..1642688
Genome browser
AA seq
1594 aa
AA seq
DB search
MRSLIRALVAWSWVAVCVRAAMDECADDQDTPQRCMPEFVNAAFNVTVVATNTCGSPPEE
YCVQTGATGVTKSCHICDARDPRNHHSAVYLTDYNNQQDTTWWQSQTMLAGIQYPNSINL
TLHLGKAFDITYVRLKFHTSRPESFAIYKRTSEGGRWVPYQYYSGSCEKTYQKASRGFIR
TGEDEQQALCTDDFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQDWVTATDIRVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNSRGRLVCNCKHNTDGDD
CNVCKPFYNDRPWRRATADNSNECLPCDCNGKSSQCYFDAELYRATGHGGHCRNCADSTD
GPNCERCLDNYHRDQSGSRCLPCGCNTVGSESPQCDNRGVCACKPGVSGEKCDRCQPGYH
SLTEAGCRPCSCSPSGSTQECDVNTGQCRCKDNVEGFSCDRCKLGYFNLDPNNPQGCTPC
FCFQHSSVCNSAEGFSVHTVSSPFHRDDEQWTGQQRDGSSVSVQWSPSGQEISLISDDYF
PMYFVAPEKFLGNQMLSYGQNLSLSFRVDRRDTRLSAEDLVLEGANLRVAVPLIAQGNAY
PNENMQTYVFRLHDSTDYPWRPTISHSDFQKLLHNLTAIKIHGTYSERSAGSLDDVSLVT
ARRGPGVPARWVEQCTCPQGYRGQHCEQCTLGYRRASPELGAFSPCESCNCNGHSEACNP
ETGACDCRDNTAGLSCERCKDGFYGDATRGTSGDCQPCPCPAGATCAVVHKTREVVCTNC
PAGTTGKRCELCDDGFFGDPLGQSGPARACRACKCSDNIDPNAVGNCNRETGECLKCIYN
TNGFFCDRCKEGFYGNALASNPADKCKPCSCSPFGTVGRQTSCSQVTGQCPCLPNVAERD
CSACQPGFFNLQSGGGCERCNCNAIGSTNGQCDIASGQCECQPGVTGRHCERCEVNFFGF
SSSGCKPCDCDPEGSQSGQCKEDGRCECRPGFVGARCDMCEENYFYNRSAPGCQQCPSCY
SLVRDKVNQQRQKLHDLQTLIDNLGSGQDTVSDKAFEDRLKEAERAIMELLEEAQSSKDV
DRGLLDRLNTINNTLTTQWNRLQNIRNTVDDTGTQADRARNRVRDAENLIDRARQELDKA
KDAIGKVDIKPPSGTGDPNNMTLLAEEARTLADKHKMDADQIEKIAKDANDTSTKAYNLL
LKTLEGEGKTSQEIDELNKKYNEAKELAKNLEKQANKVQAEAEDAGDKALKIFANLTSLP
PFDTKALEDEASKIKKEASDLDKLIDKTEKEYNDLRDDLKGKEQEVRKLLEKGKSEQQTA
DQLLARADAAKALAEEAAKKGRSTFREAESILNDLRDFDKRVNDNKTAAEDALKKIPAIN
ATIMAANEKTRQAEAALGNAAADAREAKNKAEEAEKIAGKVQKGSAKTKEDAEKAFQDTT
KLDNEVDDMMDQLSAAEQELARKKAEADQDMMLAGMASDNAKEAEDNARKAKSAVKTVLS
TITALLDQLGNIDKVDLSKLNLIDESLKSARGKMANSELDRKLAELSDVARTQEDMINDY
DRQIREIRADIANLNDIKNTLPDGCFNTPSLEKP
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagtttaatccgggctctggtcgcttggagctgggtggcggtgtgcgtccgcgct
gccatggatgagtgcgcggacgaccaggacacgccgcagcgctgcatgcccgagttcgtt
aacgccgcttttaacgttaccgtggtggcgaccaacacctgcggctctccgccagaggag
tactgcgtgcagaccggcgccaccggggtcaccaagtcctgccacatctgcgacgcccgg
gacccccggaaccaccacagcgccgtgtacctgaccgactacaacaaccagcaggacacc
acctggtggcagagccagaccatgctggcgggcatccagtacccgaactccatcaacctc
accctgcacctcggtaaggccttcgacatcacctacgtgcggctcaagttccacaccagc
cgtcctgagagcttcgccatctacaagcggaccagcgaggggggccgctgggtgccgtac
cagtactacagcggctcctgcgagaagacctaccagaaggcgagccgtggcttcatccgc
accggagaggacgagcagcaggcgctctgcaccgacgacttcagcgacatctcgccgctc
accgggggaaacgtggccttctccacgctggaggggcggcccagcgcctacaacttcgac
aacagccccgtcctccaggactgggtgacggccaccgacatcagagtgaccctgaacagg
ctcaacacgttcggagacgaggttttcaacgaccccaaggtcctcaagtcctactactac
gccatctctgacttcgctgtgggaggaaggtgtaagtgtaacggccatgccagtgagtgt
gtgaagaacagcagaggacggctggtgtgtaactgcaaacacaacacggacggcgacgac
tgtaacgtctgcaaaccgttctacaacgaccggccgtggaggagagcgaccgccgacaac
tccaacgagtgtctgccctgcgactgtaacgggaagagctcccagtgttacttcgacgca
gagctgtaccgggccacaggtcacgggggtcactgcagaaactgtgccgacagcaccgac
gggcccaactgcgagcgctgcctcgacaactaccacagagaccagagcggcagccgctgc
ctgccctgcggctgcaacaccgtcggctcggagtctcctcagtgtgacaacagaggagtg
tgtgcgtgcaaaccaggagtgagcggagagaagtgtgaccgctgccagccgggataccac
agcctgacggaggccggctgcaggccttgttcttgctcgccctctggcagtactcaggag
tgtgacgtcaacacaggacagtgtcgctgtaaagacaacgtggagggcttcagctgcgac
aggtgtaaactgggctacttcaacttggaccccaacaaccctcagggctgcaccccctgc
ttctgcttccagcactcgtcagtgtgcaacagcgccgaaggcttcagcgtccacaccgtc
agctcgcccttccacagagatgacgagcagtggaccggtcagcagcgtgacggctccagt
gtctccgtccagtggtctcccagcggacaggagatctccctcatctcagacgactacttc
cccatgtacttcgtagccccagagaagtttttggggaaccagatgctgagttacggacag
aacctgagcctgagtttccgggtcgaccggcgggacactcggctgtcggcggaggatctg
gtcctggagggagctaacctgagggtggccgtccccctcatcgcccagggcaacgcctac
cccaacgagaacatgcagacatacgtgttcaggctccatgacagcactgactacccctgg
aggccgaccatcagccactccgacttccagaaacttctccacaacctgaccgccatcaag
atccatggcacctacagcgagcgcagtgccggttcccttgacgacgtctccttggtaacg
gcgaggcggggtccaggtgttccggcccgctgggtggagcagtgcacctgtcctcagggt
taccggggtcaacactgcgagcagtgcactctgggatatcgacgcgccagtccggagctc
ggagccttcagcccctgcgagtcctgcaactgtaacggacacagcgaggcctgcaacccc
gagacaggagcgtgtgactgtcgggacaacacagccggtttgagctgtgagcgctgtaaa
gacggtttctatggcgacgccacccgggggacgtcaggtgactgtcagccctgtccctgt
ccggccggcgccacctgcgccgtcgtccacaagaccagagaggtggtctgcaccaactgt
cccgcaggaacaacaggtaagcgctgcgagctctgtgacgacggcttcttcggcgaccct
ctgggtcagagcgggccggcccgagcctgccgcgcctgcaagtgcagcgacaacatcgac
cccaacgccgtcggcaactgcaaccgtgagaccggagagtgcctcaagtgcatctacaac
accaacggcttcttctgcgaccgctgcaaggagggtttctacggcaacgccctggccagc
aacccggccgacaagtgcaaaccttgctcctgctctccgttcggtaccgttggtcgacag
accagctgttctcaggtcaccggtcagtgtccgtgtctccccaacgtcgccgagcgcgac
tgcagcgcctgtcagcccggcttcttcaacctgcagagcggcggcggctgcgaacggtgc
aactgcaatgcgattggctctaccaacggtcagtgtgacatcgcttcggggcagtgcgag
tgtcagcccggcgtcaccggccggcactgcgaacgctgcgaggtcaacttcttcggcttc
agctcgtccggatgcaaaccctgtgactgcgacccagagggctctcagtcgggtcagtgt
aaggaggacggtcgctgcgagtgtcggcccggcttcgtcggagctcgatgtgacatgtgc
gaggagaattacttctacaaccgctcggcgccgggctgccagcagtgtccttcctgctac
agtctggtcagagacaaggtgaaccagcagaggcagaagcttcacgacctgcagactctg
atcgataacctcggctcgggtcaggacaccgtcagcgacaaggccttcgaggatcggctg
aaggaggcggagagagccatcatggagctgctggaggaggctcagagcagcaaagatgta
gaccgaggtctgctggatcgtctgaacaccatcaacaacactctgaccacccagtggaac
cgactgcagaacatccgcaacacggtggacgacaccggcactcaggccgaccgcgcccgc
aaccgagtccgagacgccgagaacctgatcgaccgagcccgacaggagctggacaaggcc
aaggacgccatcggcaaagtggacatcaaaccccccagcggcaccggagatccgaacaac
atgacgctgctggctgaggaggctcgcacgctggctgataagcacaagatggacgccgat
cagatcgagaagattgccaaagatgccaacgacacgtcgaccaaagcgtacaacctgctg
ctgaagactctggagggagagggcaagacgagtcaggagatcgacgagctcaacaagaag
tacaacgaggcgaaggagctggcgaagaatctggagaaacaggccaacaaggttcaggcc
gaggctgaagacgccggagacaaagctctgaagatcttcgccaacctgaccagcctcccg
ccgttcgacaccaaggctctggaggatgaagccagtaagatcaagaaggaggcgtcggac
ctcgacaagctgatcgataagacggagaaggagtacaacgacctgagagacgacctgaag
ggcaaagagcaggaagtccgcaaactgctggagaaaggcaaaagtgagcagcagactgca
gatcagctgttggctcgagccgacgccgccaaagctctggccgaggaggcggcaaagaag
ggccggtccaccttcagggaggccgagagcatcctgaacgacctcagagacttcgacaag
agggtcaacgacaacaagaccgccgctgaggacgccttgaagaagattcccgccatcaac
gccaccatcatggccgccaacgagaagaccaggcaggcggaggcggcgctcggcaacgcg
gctgccgacgcccgagaggccaagaacaaggcggaggaggccgagaaaatcgccggcaaa
gtgcagaagggctcggccaagaccaaggaggacgcagagaaggccttccaggacaccacc
aagctggacaacgaggtcgacgacatgatggaccagctgagcgctgccgagcaggagctg
gccaggaagaaggccgaggccgaccaggacatgatgttggcgggaatggcgtcggacaac
gctaaggaggcggaggacaacgcccgcaaggccaagagcgccgtaaagacggttctgagc
accatcaccgccctgctggatcagctgggaaacatcgacaaggtggacctgagcaaactg
aacctgatcgacgagtccttgaagagcgccaggggcaagatggccaacagcgagctggac
aggaagctggcggagctgagcgacgtggcgcggacccaggaggacatgatcaacgactac
gaccggcagatccgcgagatccgcgccgacatcgccaacctcaacgacatcaagaacacg
ttacccgacggctgcttcaacacgccgtctctggagaagccttaa
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