Sorangium cellulosum So ce56: sce2101
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Entry
sce2101 CDS
T00634
Name
(GenBank) possible Pectine lyase family protein
Organism
scl
Sorangium cellulosum So ce56
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6519
Beta_helix
UBact
DUF5801
Motif
Other DBs
NCBI-ProteinID:
CAN92260
UniProt:
A9FVC3
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Position
2846020..2850003
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AA seq
1327 aa
AA seq
DB search
MKGDFSRRTFDPTRHYRSLLMQQGRVQLDADWNEQAEIVAHRVETEALDLIGRAGGPMHA
AGFRLVTATDALTDDEKAIPGNAAPLTIPAGALAITAGRYYVDGILCENDQRILLDNQPD
FPAAAPSSNGVYLAYLDVWQRHITVIEEPHLREVALGGPDTATRIKTVWQVRLADIGALA
SPNCKSAFEAFLAAHPPPNGTMAAFCTHEARSSDPCIVSPSAGYRGLENQLYRVEIHENS
ARNPATNAPAVQATVSTDRRSIQISTASALFAAVQARLVAKESAAVEIFTDKGSAVVFAI
KVDAATGTLTFSGGVGKDVINEDQPKVRLVDAVFKWSRDNGSVVTTINKIDKDKLTVHDV
GRDTILGFAPGQWVEITDERKELRGELGEIVQIKETDGKRTITLAAEPTPLGGSSGVNPG
ATAKLRRWDGIGAIRFGSTDWIELENAVQVQFKNTRFQRGDYWNIPARAATADERSGQID
WLPEKSHKPAVGVEHHYAALGLVTRTSDTAVSVHDCRKLFPPVTELTSFFYLGGDGQEVM
PDLTLPAALSLLPADLVVGVSNGQWPVKGARVRFKILHEARPDGGSIPGAGALAPAPTYT
NVGAASDQEIVLETAADGTARARWSLGASAGNLYQVRAELLDVTGAVRHLPITFTANRSV
ASQVAFDPGQCAALQGKKTVQAAIEQLAHEPVLRLLSGDGQDAMPGQVLPLPIQIEVRDH
CGPLVDAQLNISAPGALAVSSAGVGSGAGPATLTLTTDNNGVAAFSWRPDPAGAPVQRAR
VTLTNPSRVPGPAAWIEVTANLSTAAQVAFTPDPGCRLLQGTSTVQQALERICSDGACRE
IIVTPESKLKEVFDSIGEKEDAHVCFTPGTFHFESPVLIGGKGHLKISGAGEATFLDAGN
IEKALVFIECKSVLARDLSGRAGVAQVPEKPGEESPPRHLNGVLTFRGTDRVTVENVRLQ
SGAGPVRAASAMTVVDAEDVRVRGSTFLVEDAQVGLLLVDVKRAEVVDNVVKVVSGKVEL
GWLMQNPRYRAGLRRLVLAGLQPPSAEGVEQPSEKTILERLERLDPKRAKELFALIRPRS
LRTPQATLLTVAVLSGRDWPTLLNTISEPSKLSLAELKGALDGHIDAVFGALAGLHVTPP
VPVAELPGFKHLYDLLADERTSIAAQGIVVAGEHAGDVRVRDNTVRGALQGIHVGLSHAP
RDDGGPRRDAIQRLLVEGNTVYVHFSLDEQRDRHGIFVGNAQSLVIENNFVVVERTPLAA
AGYIEGIRVFGDQGGMCIIRQNHLVDFDCGVRVQATNPGRPPRLWRVADNFAEFAVDQEI
TDPSPFE
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcgatttcagccggcggacattcgaccccacgaggcattaccgcagcctgctc
atgcagcagggccgcgtgcagcttgacgcggactggaacgagcaggccgagatcgtcgct
caccgcgtcgagaccgaggcgctcgatctcatcggccgcgcgggcggtccgatgcacgcc
gccggcttccgcctcgtgaccgcgacagacgcgctcaccgacgacgagaaggccatccct
ggcaacgccgcgccgctgacgatcccagccggcgcgctcgcgatcaccgccggccgttac
tacgtcgacgggatcctctgcgagaacgaccagaggatcctgctcgacaaccagccggat
tttccggccgcggcgccgagctcgaacggggtctacctcgcgtacctcgatgtctggcag
cgccatatcaccgtcatcgaggagccgcacctccgcgaggtcgcgctcggcggccccgac
accgcgacgcgcatcaagaccgtctggcaggttcgcctcgccgacatcggggctctcgcg
tccccgaactgcaagagcgccttcgaggccttcctcgcggcgcatccgccgccgaacggc
acgatggccgcgttttgcacccacgaggcgcgcagctccgacccctgcatcgtctccccg
agcgccggctatcgcggcctggagaaccagctctatcgcgtcgagatccacgagaacagc
gcgcgcaaccccgcgacgaacgcgcccgccgtccaggccacggtgagcaccgaccggcga
tccatccagatctcgacggcctccgcgctcttcgcggccgtgcaggcccggctcgtcgcc
aaggagagcgccgcggtcgagatcttcacggacaagggctcagccgtcgtcttcgcgatc
aaggtcgacgccgcgacgggcacgctcacgttctcgggcggtgtcgggaaggacgtcatc
aacgaagaccagcccaaggtgcgcctcgtcgacgccgtcttcaagtggtctcgcgacaac
ggctccgtggtgaccacgatcaacaagatcgacaaagacaagctcacggtccacgacgtc
ggccgcgataccatccttggctttgcgcctggccagtgggtggagatcaccgacgagcga
aaggagctccgaggtgagctcggcgagatcgtgcagatcaaggagaccgacggcaagcgc
acgatcacgcttgccgccgagcccacgccgctcggcggcagctctggcgtcaaccccgga
gccaccgccaagctgcgccgctgggacggcatcggcgccatccgcttcggctccaccgac
tggatcgagctggagaacgccgtccaggtccagttcaagaacacccgctttcagcgcggc
gactactggaacatccccgcgcgcgccgcgaccgccgacgagcgctccggtcagatcgac
tggctcccggagaagtcgcacaaaccggctgtcggcgtcgagcaccactacgccgcgctc
gggctcgtcaccaggacgagcgacaccgctgtctcggtccacgactgccggaagctgttc
ccgcccgtcaccgagctcaccagcttcttctatctcggcggcgacggtcaggaggtcatg
cccgatctcaccctgccggccgccctgtcgctgctcccggccgatctcgtcgtcggcgtc
tccaacggccagtggcccgtgaagggggcgcgcgtgcgcttcaagatcctccacgaggcg
cgacccgacggcggctcgatccccggcgccggcgcgctcgcgcccgcccccacgtacacc
aacgtgggggccgcgagcgatcaggagatcgtcctcgagacggccgccgacggcaccgcc
cgcgcgcgctggtctctcggcgcgtcggccggcaacctctaccaggtccgggccgagctc
ctcgacgtcacgggcgcggtccgacacctgcccatcaccttcaccgccaaccgcagcgtc
gcctcccaggtggcgttcgatcccggccagtgcgccgcgctccagggcaagaagacggtg
caggccgccatcgagcagctcgcccacgagcctgtgctgcgcctcctctccggcgacggc
caggacgcgatgccgggccaggtcctgcccctgccgatccagatcgaggtgcgtgatcac
tgcggtccgctcgtcgatgcgcagctcaatatctccgcccccggcgccctcgccgtgagc
tccgccggcgtgggttctggcgccggtcccgccacgctcaccctcaccaccgacaacaac
ggcgtcgccgcgttctcctggcgccccgacccggccggcgcgccggtgcagcgcgcgcgc
gtcaccctgacgaacccctcgcgcgtccccggccccgccgcgtggatcgaggtcaccgcc
aacctgagcaccgccgcgcaggtcgccttcacgcctgatccaggctgccgcctgctccag
ggcacctcgaccgtgcagcaggcgctcgagcgcatctgcagcgacggcgcttgccgcgag
atcatcgtcacgcccgagtccaagctcaaggaggtgttcgacagcatcggcgagaaggag
gacgctcacgtctgcttcacgcccggcaccttccacttcgagagccccgtgttgatcggc
ggcaagggccacctcaagatctcgggcgccggcgaggccacgttcctcgacgccggcaat
atcgagaaggcgctcgtcttcatcgagtgcaagagcgtcctcgcgcgtgatctctccggt
cgcgccggcgtcgcccaggtgcccgagaagccgggggaagaatcgccgcctcgccacctc
aacggcgtgcttaccttccgcggcaccgatcgcgtcacggtggagaacgtccgcctccag
tccggcgctggcccggtgcgcgccgcctcggccatgaccgtcgtcgacgccgaggacgtg
cgcgtccgcggatccaccttcctcgtcgaggacgcgcaagtcggcctcctgctcgtcgat
gtgaagcgcgccgaggtcgtcgacaacgtcgtcaaggtcgtctccggcaaagtcgagctc
ggttggctgatgcagaaccctcgttatcgcgccggtctgcgcaggctcgtgctggccgga
ctccagccgccgtcagcggaaggggtggagcagcccagcgagaagacgattctcgagcgc
ctcgagcgcctcgacccgaagcgcgccaaagagctgttcgcgctgattcggccgcggtcg
ctccggacgccgcaggctaccctgctcacggtcgcggtgctgagcgggcgcgactggccg
acactgctgaacaccatctccgagccctcgaagctgtcgctcgcggagctgaagggggcc
ctcgacgggcacatcgacgcggtcttcggcgccctcgcgggcctccacgtgactccgccg
gttcccgtcgcggagttgcccggctttaaacacctgtacgacttgctcgccgacgagcgc
accagcatcgcggcgcagggcatcgtggtcgcaggcgagcacgcgggtgacgtccgcgtc
cgcgacaacacggtgcgcggtgccctccagggcatccacgtcggcctcagccacgcgccc
agggacgacggcggtccgcgccgcgatgccatccagcggctgctcgtcgagggcaatacc
gtgtacgtacacttcagcctcgacgagcaacgcgaccgtcacggcatctttgtcggcaac
gcgcagagcctcgtcatcgagaacaacttcgtcgtcgtcgagcgcacacccctcgccgcc
gccggctacatcgagggcattcgcgtcttcggcgatcagggcgggatgtgcatcatccgc
cagaaccacctggtcgacttcgactgtggcgtccgggtccaggccacgaaccccgggcgc
ccgccgcgcctctggcgcgtcgccgacaacttcgccgagttcgcggtcgaccaggagatc
accgacccgagcccgttcgaatga
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