Sorangium cellulosum So ce56: sce3040
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Entry
sce3040 CDS
T00634
Name
(GenBank) hypothetical protein
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
scl
Sorangium cellulosum So ce56
Brite
KEGG Orthology (KO) [BR:
scl00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
sce3040
Enzymes [BR:
scl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
sce3040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP_3
FG-GAP
Motif
Other DBs
NCBI-ProteinID:
CAN93199
UniProt:
A9GFU2
LinkDB
All DBs
Position
4164893..4166956
Genome browser
AA seq
687 aa
AA seq
DB search
MRRPIFLICFSLAAAHLACGSSGEPGTGSDGSDGAGGEGAGTGGGGATGAASSGSGSGSG
SGAGTSAVSGSGGAGTSAATGSGGSGAGSGAGSGAGEPTGFAQMEDLDRGVVAVPTDGGT
YVGFRLFGYDPDDIAFNVYRDGAKVNAAPLTDSTNLVDRDGSPSSVYTVRPVIGGVEQGE
SESAPVWKDGALSIPTTPPPAGDGYTYSSGDGSVGDVDGDGRYEIILKWDPSNLQDNSKA
GRTGKTYLDAYSLDGKRLWRIDLGVNIRAGAHYSPFLVYDLDGDGKAEVAVKTAPGTRDG
RGEYLSKGPAAGDDDSKDYRNNDGYILTGPEYLTVFAGDTGAELATTEFKVGRGDVCSWG
NNECYGNRVDRFVGTIAFLDDTGRPSVVFGRGYYARTTLSAWNYRDGALSNLWTFDSSSS
RANEAFGGKGCHSISVANVDDDPQQEIINGGATFDNDGTGLCAVDYYAHGDALHVTDHIP
SRPGLEVFQPYESGDAPAYAMRDARTCEVLWKGPGNGGEEGPGRGVAADVDPRSPGSEAW
VNNSELLRGSDGDGVGSRPASSNFLIWWDADLSRELLDGNGIRQADGQGGNFTAAGCTSN
NGTKSTPTLSADILGDWREEVIFRCGDSIRIFTTNQVATNRIYTLMHDPQYRVAISWQNG
AYNQPPHPSFHIGEGMAAAPKPDIHVR
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgagacgacctattttcttgatttgcttttcgctcgctgccgctcacctggcatgcgga
tcgagcggtgaacccggaaccggctcggacggctcggacggcgcgggcggggagggcgcc
gggacgggcggcggcggcgcgaccggcgcggcgtccagcggcagcggcagcggcagcggc
agcggcgcgggcaccagcgctgtgtccggcagcggcggcgctgggaccagcgccgcgacc
ggcagcggcggctcgggcgccggctcgggcgccggctcgggcgccggcgagccgacgggg
ttcgcgcagatggaagacctcgaccgcggtgtcgtggccgtgcccaccgacgggggcacg
tacgtgggctttcgcctgttcggctacgaccccgacgacatcgcgttcaacgtctaccgc
gacggcgccaaggtcaacgccgcgccgctcacggactccacgaacctcgtcgaccgcgac
ggctctccgagctcggtctacaccgtgcgccccgtcatcggcggcgtcgagcaaggcgag
tcggagtccgcgcccgtgtggaaggatggagccctgtccatcccgacgacaccgccgccc
gcgggggacggctacacgtactcgagcggcgatggcagcgtgggagacgtggacggcgac
gggcgttacgagatcatcctcaagtgggatccgtcgaacctccaggacaactcgaaggcc
ggccgcaccggcaagacctacctcgacgcttactcgctcgacggcaagcggctctggcgc
atcgatctcggcgtgaacatccgggccggagcgcactattccccgttcctcgtgtacgat
ctcgacggcgacgggaaggcggaggtggccgtcaagacggcgccggggacgcgcgatggg
aggggcgagtacctgagcaaggggcccgcggccggcgatgacgattccaaggattaccgc
aacaacgacggttatatcctcaccggcccggagtacctcaccgtgtttgccggcgacacc
ggcgcggagctcgccacgaccgagttcaaggtcgggcgcggcgacgtgtgcagctggggc
aacaacgagtgctatggcaaccgcgtcgaccgcttcgtcggcaccatcgcgttcctcgat
gacacggggcgcccgagcgtggtgttcgggcgcggctattacgcgcgcaccacgctctcg
gcctggaactaccgcgacggcgcgctctcgaacctctggacgttcgactccagctcgagc
cgcgccaacgaggcgttcggcggcaagggctgccactccatcagcgtcgcgaacgtggac
gacgacccgcagcaggagatcatcaacggcggcgccacgttcgacaacgacggcacgggc
ctctgcgcggtggactactacgctcacggcgacgcgctgcacgtcacggatcacatcccg
tcgcgccctggcctcgaggtgttccagccgtacgagagcggcgacgcacccgcctacgcc
atgcgcgacgcccgcacgtgcgaggtcctctggaaggggccaggcaacggcggtgaggag
ggccctggccggggcgtggcggcggatgtcgacccgcgcagccctggcagcgaggcgtgg
gtcaacaacagcgagctgctgcgcggctcggacggcgatggcgtcgggagccgccctgcg
tcgagcaacttcctcatctggtgggacgcggacctgagccgggagctcctcgacggaaac
ggcatccgccaggccgacggccaaggggggaacttcacggccgccgggtgtacctcgaac
aacggcacgaagagcacgccgacgctcagcgccgacatcctgggcgactggcgtgaagag
gtgatcttccgctgcggcgattccatccgcatcttcaccacgaaccaggtcgcgacgaac
cggatctacaccttgatgcacgatccgcagtaccgcgttgccatctcgtggcagaacggc
gcctacaaccagccgcctcacccgagcttccatatcggggaggggatggctgcggcgccg
aagccggatatccacgtccgctga
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