Sorangium cellulosum So ce56: sce8766
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Entry
sce8766 CDS
T00634
Name
(GenBank) ECF-family RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
scl
Sorangium cellulosum So ce56
Brite
KEGG Orthology (KO) [BR:
scl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scl03021
]
sce8766
Transcription machinery [BR:
scl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
sce8766
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Las1
TreT_GT1
Motif
Other DBs
NCBI-ProteinID:
CAN98938
UniProt:
A9G4U1
LinkDB
All DBs
Position
12250826..12251947
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AA seq
373 aa
AA seq
DB search
MLLTVGKPPTVFPGFELFRRLARRHGVPERNAEDIAQEALLRGLEADKRVDPGGDPAPYR
VTIAINQARNHVRDARRRGEVLTSFDECEIQDEYPTPEELLRRRQREKFTRELIDQLDPK
YRDVVIKHDLQEVPLAEIAAEQGLPLDTVRTRHWRAHQELRLQRERWQAQERSQGRGDRL
CVPLALGFGRRASWVASLHRLGVRILVQGALAVLTGALVSSVSSLPDLQSWYGSATVPAT
PPATQEAAASPARDGAQSAAAPAGGERAHSAAAPAAPGMSLPRAQGSARVQAVASSTPVP
STTTDRRPASPASAVRPTGAERERSLINQARRAIEARNVTANVEALRLLNTHAREFPRGR
FVAEREALLRQLR
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcttaccgtgggcaagccaccgaccgtcttccccggcttcgagctcttccggcgc
ctcgccaggcgccacggcgtgccagagcgaaacgccgaggatatcgctcaggaagcgctg
ctgcgcgggctggaggccgacaagcgagtcgacccggggggagacccagcgccgtaccgc
gtcacgatcgccatcaaccaggcgcgcaaccacgtccgtgacgcacgccgccgcggcgag
gtgctgacgtcgttcgatgagtgcgagatccaagacgagtaccccacgccggaagagctg
ctccggagacggcagcgggaaaagttcacgcgggagctgatagaccaacttgatcccaag
taccgggatgtcgtgatcaaacacgatctccaagaggttccgctcgccgagatcgcggcc
gagcagggacttccgctggacacggtgaggacgcgacactggcgggcgcaccaggagctc
cggctgcagcgggagcggtggcaggcgcaggagcgctcgcaaggaaggggcgatcgcctc
tgcgtgccgctcgcactgggcttcggccgtcgcgcgtcgtgggtggcctcgctacaccgc
ctgggcgtgaggatcctcgttcagggggcgctcgccgtgctgaccggcgcgctcgtctcc
tcggtgtcgtccctgcccgacctgcaatcgtggtacgggtcggcgacggtccctgccacc
ccgcccgctacgcaggaggctgcggcgtcccctgcgcgagacggcgcgcaaagcgccgca
gcgcccgccggcggagaacgcgcgcacagcgccgcagcaccggccgcgcccgggatgtcg
ttgccgagggcccaaggaagcgcgcgcgttcaggccgtggcgagcagcacgcccgttccc
tcaacgacgaccgatcgccggcccgcgtctccggcgagcgccgttcgaccgaccggcgcg
gagcgcgagcggagcctgatcaaccaggcccggcgggccatcgaggcccgcaatgtcacg
gcgaacgtcgaggctctccggctgctgaacacccacgcgcgggagttcccccgtgggcgg
ttcgtcgccgagcgcgaagcactcctccggcagcttcgctga
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