Streptomyces clavuligerus: BB341_05890
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Entry
BB341_05890 CDS
T04717
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sclf
Streptomyces clavuligerus
Brite
KEGG Orthology (KO) [BR:
sclf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sclf03016
]
BB341_05890
Enzymes [BR:
sclf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BB341_05890
Transfer RNA biogenesis [BR:
sclf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BB341_05890
Prokaryotic type
BB341_05890
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
DinB_2
Motif
Other DBs
NCBI-ProteinID:
ANW17787
UniProt:
E2Q963
LinkDB
All DBs
Position
complement(1538737..1539636)
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AA seq
299 aa
AA seq
DB search
MTQRPTPPDGLVIVDKPSGFTSHDVVAKMRGIARTRRVGHAGTLDPMATGVLVLGVERAT
KLLGHLALTEKEYLGTIRLGQTTVTDDAEGEITASADASAVTRQAVDTGVAALTGAIMQV
PSKVSAIKIDGKRSYARVRGGEEFEIPARPVTVSSFRVYDMREDRAEDGTPVMDLVVSVV
CSSGTYIRALARDLGAALGVGGHLTALRRTRVGPYGLDAARTLDQLQEELAVMPIAEAAA
AAFPRWDVDERRARLLVNGVRLDMPAYEAEPVAVFGPEERFLALVKEERGKAKSLAVFV
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgacacagcggcccaccccgcccgacggcctcgtcatcgtcgacaagccgtcgggcttc
acctcgcacgacgtcgtcgccaagatgcgcggcatcgccaggacgcgccgcgtcggccat
gcggggacactcgaccccatggccaccggtgtgctggtgctcggcgtcgagcgtgcgacc
aagctcctcgggcacctcgccctcacggagaaggagtacctcggcaccatccggctcggt
cagacgaccgtcaccgatgacgccgagggcgagatcaccgcgtccgccgacgcctccgcg
gtcacccgccaggccgtcgacacgggcgtggccgccctcaccggcgcgatcatgcaggtc
ccgtccaaggtcagcgccatcaagatcgacggcaagcggtcctacgcccgggtccgcggc
ggcgaggagttcgagatcccggcccgcccggtcaccgtctcctccttccgcgtctacgac
atgcgcgaggaccgcgccgaggacggcaccccggtcatggacctggtggtctccgtcgtc
tgctcctccggcacatacatccgtgccctcgcccgtgacctcggcgccgcgctgggcgtc
ggcgggcatctcacggcgctgcgccgcacccgggtcggcccgtacggcctggacgcggcc
aggacgctcgaccagctccaggaggagctggccgtgatgccgatcgccgaggccgcagcg
gcggcgttcccccgctgggacgtggacgagcggcgcgcccggctgctggtgaacggtgta
cggctggacatgcccgcgtacgaggccgaaccggtcgccgtcttcgggccggaggagcga
ttcctcgccctggtgaaggaggagcgcggcaaggccaagagcctcgccgtgttcgtctga
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