Sphingobium cloacae: SCLO_1008010
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Entry
SCLO_1008010 CDS
T05301
Name
(GenBank) polynucleotide adenylyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sclo
Sphingobium cloacae
Pathway
sclo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sclo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCLO_1008010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclo03019
]
SCLO_1008010
Enzymes [BR:
sclo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SCLO_1008010
Messenger RNA biogenesis [BR:
sclo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SCLO_1008010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
BAV63841
UniProt:
A0A1E1F043
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All DBs
Position
SCLO_1:933823..935034
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AA seq
403 aa
AA seq
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MILSLPDASWRHRAGLESLLSALEADRGHARFVGGMVRDSLLGLPVNDLDIATTLTPRQV
IERLNGAGIKAVPTGIDHGTVTAVTAGGPVEITTLRHDVSTDGRRATIAYTTDWREDAAR
RDFTINALYADPLTGEISDYFNGIGDLETRRVRFIGDASARIAEDHLRILRYFRFLARFG
HDEPDTEAYAACMAAANSLMALSRERIADEFLKLLAVTAPVAALRLMVDGGILRPVLPEI
DVAGIERLARLVEREAACAAQPAPLRRMAALLPPDAQAADAAGARLKLSNKARKRLVAAL
EVMPPDLPPRTLAWRIGVEGAVDRILLDPSAPLASLTEIEEWTPPRLPIGGGALIARGLT
PGPDVAKALHEVQEIWVAEGFPDAARVAQIADQTVSKFQRARQ
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgatcctgtcactgcctgacgcttcctggcgtcatcgcgcgggccttgagagcctgctt
tccgcgctggaagcggatcggggccatgcgcgcttcgtcggcggcatggtgcgcgacagc
ctgctgggcctgccggtcaacgatctggacatcgccaccacgctgacgccacggcaggtc
atcgaacggctgaacggggcgggaatcaaggcggtgccgaccggaatcgatcatggcacg
gtgacggcggtaacggcgggaggcccggtcgagatcacgaccctgcgccatgacgtcagc
acggacggccgccgcgccaccatcgcctatacgaccgattggcgcgaagacgcggcccgg
cgcgacttcacgatcaacgccctgtatgccgatccgctgaccggcgagatcagcgactat
ttcaacgggatcggcgatctggaaacgcggcgagtgcgcttcatcggcgacgcttcggcg
cgcatcgcggaggatcacctgcgcatcctgcgctatttccgtttcctcgcccgcttcggt
catgacgagccggataccgaagcctatgccgcgtgcatggcggccgcaaacagcctgatg
gcgctgtcccgcgaacgcatcgccgacgagtttctgaagctgctggccgtcaccgccccc
gttgccgccctgcgcctgatggtggacggcgggatattgcgcccggtgctgccggaaata
gacgtggcgggcatcgagcggcttgcgcggcttgtcgaacgggaagcggcctgcgcagcg
cagcccgcgccgctgcgccgtatggccgccctgctcccccccgatgcacaggcggcggat
gcggcaggcgcgcggctcaagctctccaacaaggcccgcaagcggctggtcgcggcgctg
gaagtcatgccgccggacctgccgccccgtacgcttgcctggaggataggcgtggaaggc
gcggtcgaccgcatcctgctcgatccgtccgcgccgctcgcgtccctgaccgaaatcgag
gaatggacgccgcccaggctacccatcggcggcggagcgctgatcgcgcggggcctcacg
cccggccccgacgtggcgaaggctcttcatgaagtacaggaaatctgggtggcggagggc
tttcccgacgccgctcgcgtcgcgcagatcgcggatcagaccgtttcgaagttccagcga
gcgcgccagtaa
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