Schizophyllum commune: SCHCO_01132534
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Entry
SCHCO_01132534 CDS
T01331
Symbol
SCHCODRAFT_01132534
Name
(RefSeq) DEAD-domain-containing protein
KO
K17679
ATP-dependent RNA helicase MSS116, mitochondrial [EC:
5.6.2.7
]
Organism
scm
Schizophyllum commune
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
scm03029
]
SCHCO_01132534 (SCHCODRAFT_01132534)
Enzymes [BR:
scm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SCHCO_01132534 (SCHCODRAFT_01132534)
Mitochondrial biogenesis [BR:
scm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
SCHCO_01132534 (SCHCODRAFT_01132534)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ERCC3_RAD25_C
ResIII
Motif
Other DBs
NCBI-GeneID:
9590956
NCBI-ProteinID:
XP_003028929
UniProt:
D8QDQ4
LinkDB
All DBs
Position
Unknown
AA seq
747 aa
AA seq
DB search
MVFPLAPALRRSLLSRGATSAFLHRSASFLAGRTVQVGLVQSLRASNVQLSRTRWQSTAA
APATAHFTGSAEDELAFGEGDGGDRPAPTLDTLQGKVSEETLKGLRDMGITRLSPVQEAV
FSHLPALAVPISQRPEGSKDTRDLLVKARTGTGKTLGFLVPAIEMRKRSIEAAGAAALKE
ATNESDTRLRRQAERSFARGNVGTLIISPTRELATQIAAEAIKATKYHGMEVRLFTGGAN
KRMQMRDFLRGRRDIVVATPGRLRDLLTTEPDMKAAFAKMDLLVLDETDTVLEIGFRDDL
DAISEYLPTAEHRQTLLYSATVPRNVQQVARNFMHKQHEVIDCIKDDAPPVHAHVPQYFT
LLPSARDQIPHLLRLIAHDQMTNPGHSKVVVFFPTLKLTQLFATILRSLASKTTPAGRAT
RVHELHSKMTQAGRDKASQAFRSDTSGAAVMVTSDVSARGVDYPNVSRVIQVSIPSSKEQ
YIHRVGRTGRAGSKGVNPRGDLVLHEWEGAFATWELADIPIKPTSVDALKDEVADLASKF
DAGDLQLPSELRRSRLAESWTGDARQVVDEIETATQQLLRRVDEIAVRDTFVSMIGFYSA
KVETLRTSRDAVVEALRAWTVDAMGLAQPPYVSPSFLQRIGMGDTGKKSSRGGGYGSGFG
QPRERSTRRGDGPRLSKPWTGRGRPRSDEHEDRGGYEGRRENRGYEGRRERREFDGRREY
RDRDDFGGKRERRNSYESRRDRFDFDA
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggtcttcccattggcgccggcgctgcgtaggtcccttttgtctcgcggggcgacctcc
gcattccttcaccgctctgcttccttcctcgccggaaggactgtgcaagtcggtctggtg
cagtctctgagggcgtcaaatgtacagcttagcaggacaagatggcaatcgactgctgcc
gcccctgcgaccgcgcactttactggctcggccgaagatgagcttgctttcggtgaaggc
gacggcggggataggcccgcacccaccctcgacacgctccagggcaaggtctccgaggag
acgctcaagggtctgcgcgacatgggcatcacccggctctcccccgtccaggaggccgtc
ttctcccacctccccgcgcttgcggttcccatctcccagcgcccagagggcagcaaggac
acacgggacctcctcgtcaaggcgcgcacgggcacgggcaagacgctcggcttcctcgtg
cctgcgatcgaaatgcgcaagcgctcgatcgaggccgcgggcgccgcggcgctgaaggag
gccactaacgagtcggacacgcgcctgcgtagacaggctgagcgctcgtttgcgaggggg
aacgttggtaccctgatcatcagtccgacccgcgagttggccacgcaaattgcggcggag
gcaatcaaggcgaccaagtaccacggcatggaggttcgcctgttcacgggcggcgccaac
aagaggatgcagatgcgggacttcctcaggggtcggcgcgacatcgtcgttgcgacgcct
ggtcgtctgcgggatctgctcaccacggagccggatatgaaggccgcattcgcaaagatg
gacttgctcgttctcgatgagaccgacactgtcctcgagatcggtttccgcgacgacctc
gacgccatcagcgagtaccttccgacggccgagcaccgtcagaccctcctttactccgct
accgtgccccggaatgtccagcaggtcgctcgcaacttcatgcacaagcagcatgaggtc
atcgactgcattaaggacgacgcgccccccgttcacgcccacgtaccgcagtacttcaca
ctcctccccagtgctcgcgaccaaattccccacctcctccgtctcattgctcacgaccag
atgacgaaccctggacactcgaaggtcgtcgtcttcttcccgacattgaagctcacgcag
ctctttgccaccatcctacggagtctggcctcgaagacaacacctgcaggtcgcgccacg
cgtgtccacgagctacactcgaagatgacgcaggccgggcgtgacaaggcgtcgcaggcg
ttcaggagcgacacgtcgggcgccgccgtcatggtcacctccgacgtgtctgctcgtggg
gttgactacccgaatgtctcgcgtgtcatccaggtcagcatcccctcatcgaaggagcag
tacatccatcgcgttggccgcaccggacgcgcggggtcgaagggcgttaatcctcgcggt
gaccttgtcttgcatgaatgggagggcgcgttcgcaacttgggaacttgcggacatccct
atcaagcccacctcagttgacgcgctgaaggacgaggttgcggacctggcctcgaagttc
gacgcaggcgatctccagcttccatccgagttgcgccgctcaagattagcggagtcttgg
acaggggacgccaggcaagtggtggacgaaatcgagaccgctacgcagcagttgttgcgc
cgcgtcgacgagatcgccgtgcgggatacctttgtctcgatgattggcttctactccgcg
aaggttgagacactgcgcaccagtagggatgccgtcgtcgaggcgctgcgtgcgtggaca
gtagacgccatggggctggcgcagccgccatacgtgtcaccgagcttcctgcagcggatc
ggcatgggcgacaccggcaagaagagcagccgtggcggcggatatggcagcgggttcggg
cagccgagggagcgctcaacgaggagaggagatgggccgcggctatcgaagccgtggacg
ggcagggggcggccaaggtctgatgaacatgaagaccgcggcggctatgagggaaggagg
gaaaacagggggtacgagggccgcagggaacgccgcgaattcgacgggcggagggagtac
cgcgaccgtgacgactttggcggcaagagggagcgcaggaactcgtacgagtcccggcgc
gaccgcttcgacttcgacgcttga
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