Schizophyllum commune: SCHCO_02485492
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Entry
SCHCO_02485492 CDS
T01331
Symbol
SCHCODRAFT_02485492
Name
(RefSeq) Vps54-domain-containing protein
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
scm
Schizophyllum commune
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
scm01009
]
SCHCO_02485492 (SCHCODRAFT_02485492)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scm04131
]
SCHCO_02485492 (SCHCODRAFT_02485492)
Protein phosphatases and associated proteins [BR:
scm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
SCHCO_02485492 (SCHCODRAFT_02485492)
Membrane trafficking [BR:
scm04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
SCHCO_02485492 (SCHCODRAFT_02485492)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54
Vps54_N
Syndetin_C
ACT_4
Motif
Other DBs
NCBI-GeneID:
9597129
NCBI-ProteinID:
XP_050202757
LinkDB
All DBs
Position
Unknown
AA seq
1183 aa
AA seq
DB search
MSRASSPTPSGTSTPTTYPEDNQQTPVPHARVPFRFTYDPASRRGPGSVISSLRGPESVS
GATEAAGRADLTGHSFSHAWSLNASSSALAIPSEWSSSKHGFHAISTVLNNPHKRQAPPK
AHSAIPSVPPADLPRVRRKDFDSYLNAVRGEWDKFESAKRELAAEADEHGSDPDVAAASG
DLPPTPTPTSKAKGKAKAMPSLDTVPPVFFAREFDLADCSTWDAITEHADPTALAHALPL
LDKFSHYADTVEQHLTYEISVRSSSFFAALSNLHSLQSSSKSCLTRIQELRAQLNGVDEG
AKKGLEITRAEIKLGRLQQVIAEVDGVKGVLDVVALGRRLVADGMWSEALAVLNELQQLW
DGRPEAINGNVNGNGRLSPTREEDEDERAPTPPSTSAPHPTTSIPLSRLKAFEQLPTHLR
TLTQQISEELSKEVVGVLRTDLLDRIQSTPPPESEQEHLRAQRDERLQDHLRPLLQALWS
TKGVKDAIGTHWREEVGGIVKNVVREHLPSGSVYPDSDFDTKSNDTELYKRLTALTQPEF
MVLIRAPYAALLRGAEGVRDQGKLITEVLGGLAGDDVSQSDLQTELGDSLSTYTETANAV
AARIISCRSEQHVQNLSLDEFVDLFNETWNFLVKCEVVCGRMIVSLRGAIVSQAKGFLQT
FHQQRVSQSAKLLEDEVWKDEDCSEEAQTAANIIVDCAVKDSPALFVNPPTLPTSPSSDP
HGIDPAPSMPSLTSMSTMPSGLPPSTPPLKQQQSNGTHHSSKDKRPIYIDSQPLYVVTAT
MNAVPLCADYLRVIANLPLLTTDSMGRAIEFFKAFNSRVCQVVLGAGAMRSAGLKNITAK
HLALASQSLSVMIALIPYVRETFRRHLNPKQAVMLIEFDKMKRDLQEHQHEVHLKLIAIM
SDRINQHMKALQAVDWESTKDEGVNGYMTLMTKETMTLHKVLTKFLALPVVEMVMTQVFA
AINHRLSEEFTKIDLPHDQAKQRLLKDAKHFYDRVSTIKNVPAPSSNMVETVISEKRTRQ
HTPAPHPPARSSTINAFSHTANSRLRGLLSRSSTATEKQPLSPLPPTSPHPGPTSPHTGS
VSPIFTGSSPPIFPGSSGSPIAQPLPYQPRQSGSGPPSRVTSPGPRAQSPLPPLPGSPLP
PIPGSPLPVTNGHGDGGHSSDSLAPGFRQVVSEEPESIEGQDS
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcgcctcgtccccaacgccttctggaacctctacccccaccacctacccggaa
gacaatcagcaaacgccagtcccccatgcgcgcgtcccattccggtttacatacgatccg
gcatcgcgtcgcgggcccggcagcgtcatatcctcgctacgtgggcccgagagcgtctcg
ggggcgactgaggcggcgggacgcgcagatctcaccggtcatagcttctcgcacgcgtgg
agcttgaatgccagcagtagtgcgcttgctatcccgtcggaatggagtagcagcaaacac
ggcttccatgcaatctccaccgtcctgaacaaccctcacaagcgacaggctccccccaaa
gcgcactctgccatcccatcagtccctccagccgatctcccgcgcgttcgtcgcaaggac
ttcgactcgtacctcaacgcggtacgcggcgagtgggacaagttcgagtcggccaagcgt
gaactcgccgctgaggccgacgagcatggcagcgaccccgacgtggccgcagcatcaggc
gacctcccgccgacgccaacgcctactagcaaggccaagggcaaggctaaagccatgccc
tcgctcgacaccgtgccccccgtcttcttcgcgcgcgagtttgacctggcggactgctcc
acctgggacgccatcaccgaacacgccgacccgacagcgctcgcgcacgccctcccgctg
ctcgacaagttctcgcactatgcagacacggtcgagcagcacctcacgtatgagatctcc
gtccggtcctcgtcgttctttgccgcgctgtcaaatctgcactccctccagtcgtcctcg
aagtcgtgcctgacgcgaatacaggagctccgcgcgcagctcaatggcgtcgacgagggc
gccaagaagggcttggagatcacgcgcgcggagatcaagctcgggcgcttgcagcaggtc
atcgcggaggtggacggtgtgaagggcgtcctggacgtagtcgcgctcgggcgtcgcctg
gtcgctgatgggatgtggtcagaagccctcgccgtgctcaacgagctgcagcaattatgg
gatgggcggccagaagctattaacggcaatgtcaacgggaacggacggttatcacctaca
cgagaagaggacgaagatgagcgcgcgccaacaccaccatcgacttccgcgccgcatccc
acgacatcgataccactgtcacgattgaaggccttcgagcagctccctacgcaccttcgc
accctcacacagcaaatatccgaagagctttccaaagaggtcgtcggcgttctccggaca
gatctcctggatcgtatacagtcgacgccgccaccagagagcgagcaagagcacctccgc
gcgcagagggacgaacgcttgcaggaccaccttcgtccgttgctacaagccctgtggtca
acgaagggtgtcaaggacgccatcggcacccactggagagaagaggttggcggcattgtg
aaaaacgttgttcgagagcatctaccttcaggctccgtatacccagacagcgacttcgat
accaaatctaatgacactgagctatataagcggctcactgccctgacgcagccagagttc
atggtgcttatccgggctccatatgcggcgcttcttcggggcgctgagggcgtacgagac
caaggcaagctgatcaccgaagtgcttggtgggctcgccggcgacgacgtttctcaatcc
gacctccaaaccgaactcggcgacagcttgtccacctacaccgagacggcgaatgctgtc
gctgcgcgaatcatttcgtgcagatcagaacaacacgttcaaaatctatcgctggatgag
ttcgtcgacctgttcaacgagacgtggaatttcctggtgaagtgcgaggtcgtatgcggt
cggatgatcgtcagcttgcgaggtgctatcgtctctcaggcgaaaggtttcttgcagacc
ttccatcagcagcgagtatcgcagtctgccaagctcctcgaggacgaggtttggaaagac
gaggactgcagcgaggaagcccagactgccgccaacatcatcgtcgactgtgccgtcaag
gactcgcccgcgctcttcgtgaacccacccaccttacctacttccccctcctccgacccg
cacggcatcgaccccgcaccctccatgccctccctcacctccatgtccaccatgccctcc
ggcctccccccatccaccccgcccctcaaacaacaacaatccaacggcactcaccacagc
tccaaagacaaacgacccatctacatcgactcccagccgctctacgtcgtcaccgcgacc
atgaatgccgtccccctctgcgccgactacctgcgcgtgatcgcgaacctgccgctgctc
acaacggacagcatgggccgcgcgattgagttcttcaaggcgttcaactcgcgcgtgtgc
caggtcgtgttaggggctggcgcgatgcggagtgcagggctgaagaatattacggcgaag
catttggcgctggcgagtcagagcctgagcgtgatgattgcgcttatcccgtatgtgcgg
gagacgttcaggaggcatttgaacccgaagcaggcggttatgcttattgagtttgacaag
atgaagcgggacttgcaagaacaccagcatgaggtgcatctgaagttgatcgcgattatg
agcgaccgcatcaaccagcacatgaaagcgctgcaggccgtcgattgggagtcaacgaag
gacgagggcgtcaacgggtacatgacgttgatgaccaaggagacgatgacattgcacaag
gtgttgacaaaattcctggcgctccctgtcgtggagatggtcatgacgcaggtcttcgcc
gccatcaaccataggttgtcggaggagttcaccaagattgacctgccgcatgaccaggcg
aagcagagacttctcaaagacgcgaagcacttctatgaccgagtctcgacgatcaagaat
gtgcccgcgccgtccagcaacatggttgagaccgtcatctccgagaagcggacacgacaa
catactcctgcaccccatccacccgctcgcagcagcaccatcaatgccttcagtcatact
gcgaacagtcggctgagagggttgctctcccgttcgtccactgcgacggagaagcaacca
ctgtcgccattgccacccacatcgccgcaccctgggccgacctcaccgcatacgggctcc
gtgtcgcccatcttcacggggtccagtccgcccatatttcccggtagcagcggctcgcct
atcgcgcagccgctgccgtaccagccgcgccagtccggttcggggccgccgtcgcgggta
acgtcgccggggccaagagcacagtcgccgttgccgccgctacccgggtcgccgttgccc
ccaatacctgggtcgccgttaccggtgacgaatggccatggggatgggggtcattcgagc
gactcgctggcgccaggcttccgacaggtggtatcggaggagcccgagtcgatagagggg
caagacagctag
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