Schizophyllum commune: SCHCO_02617511
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Entry
SCHCO_02617511 CDS
T01331
Symbol
SCHCODRAFT_02617511
Name
(RefSeq) Sm-like ribonucleoprotein
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
scm
Schizophyllum commune
Pathway
scm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SCHCO_02617511 (SCHCODRAFT_02617511)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scm03019
]
SCHCO_02617511 (SCHCODRAFT_02617511)
03041 Spliceosome [BR:
scm03041
]
SCHCO_02617511 (SCHCODRAFT_02617511)
03032 DNA replication proteins [BR:
scm03032
]
SCHCO_02617511 (SCHCODRAFT_02617511)
Messenger RNA biogenesis [BR:
scm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
SCHCO_02617511 (SCHCODRAFT_02617511)
Spliceosome [BR:
scm03041
]
Complex A
U1 snRNP components
Sm proteins
SCHCO_02617511 (SCHCODRAFT_02617511)
U2 snRNP components
SCHCO_02617511 (SCHCODRAFT_02617511)
Complex B
U1 snRNP components
SCHCO_02617511 (SCHCODRAFT_02617511)
U4/U6.U5 tri-snRNP components
SCHCO_02617511 (SCHCODRAFT_02617511)
Complex C
U2 snRNP components
SCHCO_02617511 (SCHCODRAFT_02617511)
DNA replication proteins [BR:
scm03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
SCHCO_02617511 (SCHCODRAFT_02617511)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
LAL_C2
Motif
Other DBs
NCBI-GeneID:
9590280
NCBI-ProteinID:
XP_003033110
UniProt:
D8Q2Y3
LinkDB
All DBs
Position
Unknown
AA seq
179 aa
AA seq
DB search
MPPPKSKGGKMLALINWRIKVTINDGRQLVGQMLAFDRHMNLVLAECEEFRRIRPKKKPG
QETQPEQEVKRALGLVILRGETVVSLSVESPPPVQEDDKKSALPVGPGRGMPAGRGMGMM
PPMGAPPFQGAPMNFPPPGMPGPPPGFAGRPPGFPPGMPFPPPGFGGPGGPPPPGFQPQ
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgcctccccccaaatccaaaggcggcaaaatgctcgcgctcatcaactggcgcatcaag
gtcacgatcaacgatgggcggcagcttgttggccagatgctggcctttgacaggcatatg
aacctcgtgcttgcagaatgcgaagagttccgcaggatacggccgaagaagaagcccggc
caggagactcagccggagcaggaggtcaagcgcgctctcgggctcgtcatccttcgcgga
gagacagtggttagcttgagcgtggagtcgccgcccccggtgcaggaggatgataagaag
agcgcgctgcctgtcggtcctggacgcggtatgcccgcgggtcgtgggatggggatgatg
ccgccgatgggcgccccgccattccaaggagcgccgatgaacttcccgccgcccggtatg
ccaggtcctccccctggctttgcaggccgtccgcctggcttcccgccaggcatgcccttc
cctccgccaggtttcggtgggccaggaggccctccccctccaggtttccagccgcaatag
DBGET
integrated database retrieval system