Schizophyllum commune: SCHCO_02638741
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Entry
SCHCO_02638741 CDS
T01331
Symbol
SCHCODRAFT_02638741
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
scm
Schizophyllum commune
Pathway
scm03018
RNA degradation
scm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SCHCO_02638741 (SCHCODRAFT_02638741)
09123 Folding, sorting and degradation
03018 RNA degradation
SCHCO_02638741 (SCHCODRAFT_02638741)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scm03019
]
SCHCO_02638741 (SCHCODRAFT_02638741)
03041 Spliceosome [BR:
scm03041
]
SCHCO_02638741 (SCHCODRAFT_02638741)
Messenger RNA biogenesis [BR:
scm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SCHCO_02638741 (SCHCODRAFT_02638741)
mRNA degradation factors
5'-3' decay
Lsm complex
SCHCO_02638741 (SCHCODRAFT_02638741)
Spliceosome [BR:
scm03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
SCHCO_02638741 (SCHCODRAFT_02638741)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
9591824
NCBI-ProteinID:
XP_003028340
UniProt:
D8QFL9
LinkDB
All DBs
Position
Unknown
AA seq
118 aa
AA seq
DB search
MADRGRGGGASRGRGGGRGGGPPPPGGDKPRREAILDLSKYVNERIRVKFTGGREVTGLL
KGYDQLLNLVLDEVTEDVLLPEPHQRSLGLAVLRGPTITLVSPVDGSEQIANPFTAQE
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccgtggcagaggaggcggtgcatcccgcggtcgtggaggtggacgtggtgga
ggacctcccccgccaggaggtgacaagcctcgtcgcgaggcgatcctcgatctctcgaag
tacgtgaacgagaggatacgcgtcaagtttactgggggacgcgaggtcaccggtctcctc
aagggctacgatcagctattaaacctcgttctggacgaggtcaccgaagatgtactgctc
cccgaaccccaccaacgcagcctcggcctcgccgtcctccggggacccacaatcacgctc
gtcagccccgtcgacggctcagagcaaatcgcaaaccccttcaccgcgcaggaatag
DBGET
integrated database retrieval system
