Streptomyces coelicolor: SCO5560
Help
Entry
SCO5560 CDS
T00085
Symbol
ddl
Name
(RefSeq) D-alanyl-alanine synthetase A
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
sco
Streptomyces coelicolor
Pathway
sco00470
D-Amino acid metabolism
sco00550
Peptidoglycan biosynthesis
sco01100
Metabolic pathways
sco01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sco00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SCO5560 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SCO5560 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SCO5560 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sco01011
]
SCO5560 (ddl)
Enzymes [BR:
sco01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
SCO5560 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
sco01011
]
Precursor biosynthesis
Amino acid ligase
SCO5560 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp
ATP-grasp_4
ATPgrasp_ST
Motif
Other DBs
NCBI-GeneID:
1101001
Kitasato:
SCO5560
LinkDB
All DBs
Position
6058385..6059554
Genome browser
AA seq
389 aa
AA seq
DB search
MSTENLPQNPEQSPRRPPRKPRVAVVFGGRSSEHGISVVTAGAVLAAIDRTRYDVLPIGI
TRDGRWALTADEPERMAITERRTPDVEELAESTEGGVLLPVDPANREVVYSEPGSVPKAL
GEVDVVFPVLHGPYGEDGTLQGLLELSGVPYVGAGVLASAVGQDKEYMKAVFTSYGLKVG
PYAVIRPREWEQDRSGARKKIVDFAGEHGWPLFVKPARAGSSIGITKVDDLAGLDEAIEE
ARRHDPKILVEAALRGREIECGVLEFEDGPRASVPAEIPPPSEHAYYDFEAKYIDSTPGI
VPAPLTAEETAEVQRLAVAAFDAASCEGLVRADFFLTEDDEFVINEINTMPGFTPISMYP
QMWQASGVSYPELVDRLVQAALRRPTGLR
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgagaacctcccccagaaccctgagcagagccctcggcggcctccccgcaag
ccgcgtgtggccgtcgtgttcggcggtcgcagctccgaacacgggatctccgtggtcacc
gccggcgccgtcctcgcggccatcgaccggacgcgctacgacgtcctgccgatcggcatc
accagggacggccgctgggccctcaccgccgacgaaccggaacgcatggcgatcaccgaa
cgccgtacgcccgacgtcgaggaactggccgagtcgaccgagggcggagtgctgctcccc
gtcgaccccgccaaccgcgaagtcgtctacagcgaaccgggctcggtgcccaaggcgctc
ggcgaggtcgacgtcgtcttccccgtgctgcacggcccctacggcgaggacggcaccctc
cagggcctgctggagctgtccggtgtgccctacgtcggcgcgggcgtgctcgcctccgcc
gtcggccaggacaaggagtacatgaaggcggtcttcacctcctacgggctgaaggtcggc
ccgtacgcggtgatccggccccgcgagtgggagcaggaccgttccggggcccgcaagaag
atcgtcgacttcgccggggagcacggctggccgctgttcgtgaagcccgcgcgcgcgggt
tcctcgatcggcatcaccaaggtcgacgacctcgccggcctcgacgaggcgatcgaggag
gcccgccgccacgacccgaagatcctggtcgaggccgcgctgcggggccgggagatcgag
tgcggggtgctggagttcgaggacggcccccgggcctccgtcccggccgagatcccgccg
ccctcggagcacgcgtactacgacttcgaggccaagtacatcgactccacccccggcatc
gtgccggctcccctcacggccgaggagaccgccgaggtccagcgcctggccgtcgcggcg
ttcgacgcggcctcctgcgaggggctggtgcgcgcggacttcttcctcaccgaggacgac
gagttcgtgatcaacgagatcaacaccatgcccggcttcacgccgatctccatgtacccg
cagatgtggcaggcgagcggagtgagctacccggagctggtggaccggctggtccaggcg
gcgctgcggcggcccaccggactgcgctga
DBGET
integrated database retrieval system