Sulfidibacter corallicola: J3U87_21345
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Entry
J3U87_21345 CDS
T07864
Name
(GenBank) PKD domain-containing protein
Organism
scor
Sulfidibacter corallicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
Bact_surface_Ig-like
InlK_D3
FctA
Big_7
Big_9
Motif
Other DBs
NCBI-ProteinID:
QTD48139
UniProt:
A0A8A4TDG9
LinkDB
All DBs
Position
6857001..6865112
Genome browser
AA seq
2703 aa
AA seq
DB search
MSRLTCSNTTLDTCTNPKPFQSVPLFSGWRAAASALLLLTLAAPQGLWAGGNMEPDGAID
LPAMNTTIPEGGSVTFEGTGNDPDGNTPLTFLWDFDGGATNSTDEDPGAVTFNTAGVYTV
TFTVTDSLALADPTPAQVVITVNAPPDGTIDLPLMDTTIAEGDSVTFGGTASDPDGNTPL
TFLWNFDGGATNSTDEDPGAVTFSTAGVYNVTFTATDSLGLADPTPATVEITVNARPSGT
IDLPIANTTIAEGESVTFEGSGSDPDGHTPLTFLWDFDGGATNSTDEDPGMVTFDTPGVY
DVAFTVTDNLGLADAIPAMVTITVNARPDGTIDSPATDVQILPSGTVNFQGSGTDAENNL
PLTYDWFFDGAAGNSNLEDPGLIAFAAVGHYDVTLTVTDSLGADDLSPATRRVTVSTPPV
ATIDLPMADATIGTGETVTFGGGATDADGDLSFTFLWDFDGGATNSTVEDPGAVQFDTPG
LYTVSFTATDSLGVPSVADTVMVRVSDRPDASIDAPVGPQTVARGEALTFGATGSDPDDS
TPLTYLWDFGGGAANIGVEDPGSVQFNTNGMFTVTLTVTDSFGLEDLTPPTLTVTVTDAP
NGTIDAPATNQVIATGESVSFTGTSSDPDNSTPLTFLWDFGGGATNSMVEDPGSVTFNTA
GVYTVTFTVTDALGIADPTPGTVQVTVTDRPDGTITAPATDLLIETGSSVNFSADASDPD
NNTPLTYLWDFDGGATNSTIEDPGNVAFDTPGVYDVTFTVTDALGFADLSPDTVRITVTD
APESTIDLPASNTTVLVNGAVTFEGTATDADNNTPLTFLWDFDGGATNSTTEDPGPVTFD
TPGIYQVTFTATDALGMADPTPDTVQLIVTHAPEGTIDAPVTDQVIATGTTLNFQGTVTD
ADDNTPFTYLWDFDGGATNSTDEDPGDVTFNSVGVFDVTFTATDAFLVSDQTPATLRVTV
TDAPSGTITSPAGNQTIDVGDSLNFAGAASDPDNTTPLSFLWEFDGAVPDQNVEDPGVVT
FNTAGVYDVTFTVTDALGISDPTPATLTVTVNGPPNGTIDTPVGNQNISVGESLNFTGTG
TDPDNNTPLTYLWDFDGGAANSTTEDPGSVQFDSPGSFTVRFTVTDSLGQVDPTPATMVV
NVANAPAGIIDEPATGPVIIAPGASVFFLGSVIDPDNATPYTYLWNFDGGATNSVVQDPG
NVVFLNHGTYDTTFQVTNGLGIADPSPPGVTVIVSNRPESVIDSPAGPVNVGVGGSVSFA
GSGSDPDGDTPLTYLWTFDGAAPDSALEDPGAVTFNATGTYTVTLTATDSLGAPDDTPAT
VVVTVTDPPDGTIDTPAANLSVATGGTVSFTGSASDPDNNLPLTHLWDFDGGATNSTTED
PGAIQFDTPGVYTVTYTVTDALGVVDPTPDTVTVSVTDPPDGTIDAPASDVTIPVGGSVT
FAGSGVDPDNDLPLTFLWDFDGGATNSTVEDPGEITFDNGGTFTVTFTVSDAQGIADPTP
ATVVVTVTGAPESTIDEPTGPVTVTVGESVTFAGSGNDPDGDTPLTYAWDFDGAAPASTE
EDPGAIQFDTPGEYEVTLTVTDARGIADPTPASVTVTVGDTPNGTIDTPAEDVIIAVGES
VNFTASGNDPGGHLPLDFQWDFGGGASDSNVEDPGDVTFNSVGNFTVTLTVTNDIGLEDP
VPATITVTVSERPVGAIDTPTGQVTIVTGQTVDFTGSATDADNTTPFDFAWDFGGGAANQ
SVEDPGEVAFDTPGVYTVVMTVTDALGLEDLTPPSVTVRVSDEPDGTIDSPAGDMIIGTG
ESLNFTATAVDSDNNLPLTHFWDFGGGASDANVEDPGAVTFDTPGIYTVSYQVTDAFGIV
DPTPAEITVTVADRPESVINDPVADMIIGSGSSLLFSATGSDTGGNQPLSYFWTFAGVVP
DSAERNPGEVLFANAGIFDITLTVTNSLGLEDLTPATVRVTVTDAPEGTIDEPAASVVGV
APGESVTFSATATDADNTNPLTFAWSFDGGATDVTVEDPGSVAFADPGVYQVTFTVTDGL
GIQDPTPATRTIVVSSEVAGFIDHPTNSVIVNPGTMVEFAGTGGDPANQTPLSFLWTFDG
AAPDSTLEDPGFLTFDDPGSYAVRFIVTNAIDVADPDPPRRTIFVNDPPTGTIEQPTGDV
SIPVGASVSFQASSADPNTLSGLAPDTDLAVLWDFDGGAPNSTVEDPGTVVFQEPGVFDV
TFTVTDSRGAPDPNPPTRRIVVGSAPDGTIESPVEEELTINLGDSLDFAGSAIDPDNQMP
LTFAWDFDGAAPPSDQMEPGTILFDQQESGPIQQHLVTFTVTNNLDITDPIPDTTLITVN
RPPAGAELRLVVAGGESQSSGTPTVLDPDVDDTHLFEIVDPPEFGLLEESDGTFTYTVAP
DRHGSFEFTFRATDPGGFEVLGQGVILVLTSKVYSGLLASWPDPPIIDCLTPGDTECQND
IDTLLEIVNNPDVPRGRLGKRSRAFRLAGDPAAPVQILADGPVTSNVAPFAGMDLELRAA
IQREVEDDLDGAWPGFLLTSVPAYLSPPGSRIERWLAAVPPDSELNDLCEHSVMARWPRL
GMVPREGSTFDHGETWSAVCRADGSGEAWFALYVPSGAHGSLTVRAVPHGDDGLDEPVVE
LFAGEVGPFVTQCGDLRALGCSEAGADSAVTVHGAELRGRVLFAVVRGLEGRQGTFTLLL
ERH
NT seq
8112 nt
NT seq
+upstream
nt +downstream
nt
atgagccggcttacctgttcgaacacgactctggacacctgtacgaatcctaaaccgttc
caatccgttccgcttttctccggatggcgcgccgccgcgagcgcgctgctgctcctgacg
ttggccgcaccccaggggctgtgggccggcgggaacatggagccggacggggccatcgac
ctgccggccatgaataccacgattccggaaggcggttcggtcaccttcgagggaacgggc
aacgaccccgacggcaatacgcccttgacgttcctgtgggatttcgacggcggcgcgacc
aacagcacggacgaagatcccggtgcggtgacgttcaacacggcgggcgtgtacacggtg
accttcaccgtgaccgacagcctggccctggccgatccgacgccggcccaggtggtgatc
acggtcaatgcgcctcccgacggcaccatcgacctgcccctcatggacaccaccatcgcc
gagggcgattccgtgaccttcgggggcacggccagcgatcccgacggcaacacgcctttg
acgtttctgtggaatttcgacggcggcgcgaccaacagtacggacgaagatcccggtgcg
gtgacgttcagcacggcgggtgtgtacaacgtgaccttcacggccaccgacagcctcggc
ttggccgacccgaccccggcgaccgtggagatcacggtcaacgctcggcccagtgggacc
atcgacctgcccatcgccaatacgaccatcgccgagggcgagtcggtgaccttcgagggg
tccggcagcgatcccgacggccacacgcccttgacgtttctgtgggacttcgacggtggc
gcgaccaacagcaccgatgaagatcccggcatggtcaccttcgacacgccaggcgtctac
gacgtggccttcaccgtgacggacaatctcggtttggccgacgcgataccggcgatggtc
acgattaccgtcaatgcccggccggacgggaccatcgacagtccggcgaccgatgtccag
atcctgccgagcgggaccgtgaatttccagggctccggcacggatgccgaaaacaacctg
ccgttgacttacgattggttcttcgacggtgcggccggcaactcgaacctcgaggatccc
ggcctcatcgcgtttgccgcggtgggtcactacgacgtgaccctcaccgtgacggacagt
ctcggtgccgatgacctgagcccggccacgcgccgcgtcacggtgtccacgccgcccgtg
gcgaccatcgacctaccgatggccgacgccacgatcggcacgggcgagacggtgaccttc
gggggcggcgcgactgacgccgacggggatttgagcttcaccttcctctgggatttcgac
ggcggcgccaccaacagcacggtcgaggatccgggcgccgttcaattcgacacgccgggc
ctctacaccgtcagtttcaccgccacggacagcctgggcgtgcccagcgtggcggacacc
gtcatggtgcgggtcagcgatcgacccgatgccagcatcgatgcgcccgtggggccccag
accgtggcgcgcggcgaggccttgaccttcggcgccacgggtagcgatcccgacgactcc
acgccgctgacgtacctgtgggatttcggcggcggtgccgccaatatcggtgtcgaggac
cccggttcggttcaattcaacaccaacggcatgttcaccgtgaccctgaccgtgaccgat
agcttcggcctggaggatctgacgccgccgaccctgaccgtcaccgtgaccgacgcgccg
aacggaaccatcgacgctcccgccacgaaccaggtcatcgcgaccggtgaaagcgtttcc
ttcaccggcacgagcagcgatcccgacaattccacgccgctgaccttcctgtgggacttc
ggtggtggcgcgaccaacagcatggtcgaggatcccggttcggtcaccttcaacaccgcc
ggcgtctacacggtcacgtttacggtgaccgatgcgctgggcattgccgatcccacgccc
gggacggtgcaggtcaccgtgaccgatcgtcccgacggcaccatcacggcgcccgccacg
gacttgctgatcgagacgggtagttcggtgaatttcagcgccgatgcctcggatcccgac
aacaacacgccgctgacgtacctgtgggatttcgacggcggcgcgaccaacagcacgatc
gaggaccccggcaacgtggccttcgacactccgggtgtgtacgacgtgaccttcaccgtc
acggatgccctgggatttgccgatctgtcgccggacaccgtgcgcatcaccgtgaccgac
gcccccgaaagcaccatcgatctgcccgcgagcaacacgacggtcctggtgaatggggcc
gtgaccttcgaggggacggccaccgatgcggacaacaatacgccgttgaccttcttgtgg
gatttcgacggaggcgccaccaacagcaccaccgaggatcccggcccggtcaccttcgac
accccggggatctaccaggtgacctttacggccaccgatgcgttgggcatggccgatccc
acgccggacacggtacagctcatcgtgacccacgcgcccgagggcaccatcgacgccccg
gttaccgaccaggtcatcgccaccggcaccaccctgaattttcaggggaccgtgaccgac
gcggatgacaatacacccttcacctatctatgggatttcgacggcggcgcgaccaacagc
accgacgaggatcccggcgatgtcacgttcaactcggtcggcgtcttcgatgtgaccttt
acggccaccgatgccttcctcgtgtccgaccagacccccgcgaccctgcgggtgacggtg
accgatgcaccctcgggcacgatcaccagcccggcgggcaatcagacgatcgatgtgggt
gactcgctgaacttcgccggtgcggccagcgacccggacaacactacgccgctcagcttc
ttatgggaattcgacggtgcggtgcccgatcagaacgtagaagatcccggtgtcgtcacc
ttcaacaccgcgggcgtctacgacgtgacgttcaccgtaaccgatgcgctggggatcagc
gatccgacgcccgcgaccctgaccgtcaccgtcaacggtccgcccaacggcacgatcgac
acgcccgtcggcaaccagaacatctccgtcggggagtccctgaacttcacgggcaccggc
acggaccccgacaacaacacaccgctgacctacctgtgggatttcgacggcggtgccgcg
aacagcaccacggaggaccccggttcggtgcagttcgattcgccgggctccttcacggta
cgattcaccgtgaccgattcgctgggccaggtcgatccgacaccggccacgatggtggtc
aacgtggccaacgcgcccgccggtatcatcgacgaacccgccaccggccccgtgatcatc
gcaccgggtgcctcggtcttcttcctgggatcggtcatcgatcccgacaacgccacgccc
tacacctatctctggaacttcgacggcggcgcgaccaacagcgtggttcaggaccctggc
aacgtggtgttcctcaaccacggcacctacgacacgacgttccaggtcaccaacggcctg
gggatcgccgatccctcgccaccgggcgtcacggtgatcgtgtccaaccgacccgaaagc
gtcatcgacagccccgccggcccggtcaacgtgggtgtcggcggttcggtgagtttcgcg
gggtccggttccgatcccgacggcgatacgccgctgacctacctttggaccttcgacggt
gcggcgcccgacagtgcgctcgaagatccgggcgcggtgaccttcaacgcgacgggcacc
tacacggtgaccctcaccgcgaccgacagcctgggcgctccggacgacacgcccgccacg
gtcgtggtgaccgtgaccgatccgcccgacggcaccatcgacacacccgccgccaacctt
tccgtggcgaccggcggcaccgtgagcttcaccggctcggcttccgatcccgacaacaac
ctcccgttgacccacctgtgggatttcgacggcggcgccaccaacagcaccaccgaagac
cccggcgcgatccagttcgacacgcccggtgtctacacggtgacttacaccgtcacggac
gccctcggcgtggtggacccgaccccggacacggtcacggtcagcgtgaccgatccgccc
gacggcaccatcgatgcgccggcgagcgacgtcaccattcccgtcgggggctcggtgact
ttcgccggttcgggtgtcgatccggacaacgacctgccgctgaccttcctgtgggacttc
gacggcggtgcgaccaacagcacggtcgaggatcccggcgagatcaccttcgacaacggc
ggcaccttcacggtgaccttcaccgtatccgatgcccagggcatcgccgatcccaccccg
gctacggtcgtggtcacggtgaccggtgcaccggagagtaccatcgacgagccgacgggc
ccggtgaccgtgaccgtgggtgaatcggtcaccttcgcggggtctggcaacgatcccgac
ggcgacacgccgttgacctacgcctgggatttcgacggcgcggccccggccagcacggaa
gaggatccgggtgcgattcagttcgacacgcctggcgaatacgaggtgaccctgacggtc
accgacgcccgcggcatcgccgatcccacccccgccagcgtcaccgtcacggttggcgac
accccgaacggcaccatcgacacgcccgccgaggacgtgatcatcgcggttggcgagtcg
gtcaacttcaccgcctcgggcaacgacccgggcgggcatctgccgctcgatttccagtgg
gacttcggcgggggcgcctcggacagcaatgtcgaggatcccggcgacgtgaccttcaac
agcgtcggtaacttcacggtcaccttgacggtgaccaacgacatcggcctcgaggacccc
gtacccgcgaccatcacggtcacggtcagtgaacggcccgtgggcgccatcgacaccccc
accggccaggtcaccatcgtgaccggccaaacggtggacttcaccggctcggccacggat
gccgacaacaccacgcccttcgactttgcctgggatttcggcggtggggccgccaaccag
tcggtcgaggatcccggcgaggtggccttcgacacccctggcgtctacacggtcgtgatg
accgtgaccgacgccttggggctcgaggatttgactccgccgtccgtcaccgttcgcgtc
agtgacgaacccgacggcaccatcgacagcccggccggcgacatgatcatcggcaccggc
gaatcgctgaacttcaccgcgaccgccgtcgacagcgacaacaacctgccgctcacccat
ttctgggatttcggcggcggcgcgagcgatgcgaacgtggaggatcccggcgcggtgacc
ttcgatacacccgggatctacaccgtgtcctatcaagtcaccgacgccttcggcatcgtg
gaccccacgccggccgagatcacggtgacggtcgccgaccgtcccgaaagtgtcatcaac
gatccggtcgccgacatgatcatcggtagtggcagttcgttgttgttctcggcgaccggt
tccgataccggcggcaaccagccgctcagttatttctggaccttcgcgggtgtcgttccc
gacagcgccgagcgcaatccgggcgaagtcctattcgccaacgcgggtatcttcgacatc
accctcaccgtcaccaacagtctgggcctcgaggacttgacgccggcgaccgtgcgcgtc
acggtgaccgatgcgcccgagggcacgatcgacgaacccgcggcgagcgtggtcggtgtg
gctccgggagagtccgtgaccttcagcgcgaccgcgaccgatgcggacaacaccaatccg
ctcaccttcgcctggtccttcgacggcggtgcgaccgacgtcaccgtggaggatccgggc
agtgtcgcgttcgccgatccgggtgtctaccaggtgaccttcaccgtcaccgacggcctg
ggcattcaggatccgacgccggcgacgcgaaccatcgtcgtcagttccgaggtggccggt
tttatcgatcaccccaccaacagcgtcatcgtcaacccggggaccatggtcgagtttgcc
ggaaccggcggggaccccgccaaccagacaccgctttccttcctgtggaccttcgacggg
gcggcccccgacagcacgctggaagatcccggcttcctgaccttcgatgatccgggttcc
tatgcggttcgcttcatcgtgaccaacgcgatcgacgtggccgatcccgacccgccgcga
cgcacgatcttcgtcaacgatcccccgacgggcaccatcgagcaacccacgggcgacgtc
tcgatccccgtcggcgccagcgtgagtttccaggcttcgtcggccgatccgaacaccctg
tccggcctggcgcccgacaccgatcttgccgtgttgtgggacttcgacggcggcgccccc
aacagcaccgtggaagatccggggaccgtggtgttccaggagcccggtgtgttcgacgtg
acctttacggtgacggacagccggggtgcccccgatcccaatccgcccacccgccgcatc
gtggtgggttcggcgcccgacggcacgatcgaatcgccggtcgaagaggagctgaccatc
aacctgggagacagtctcgacttcgcgggcagcgcgatcgatcccgacaaccagatgccg
ttgacctttgcctgggatttcgacggggcggcaccgcccagcgatcagatggagccgggt
accatcctgttcgatcagcaggagtccggtcccatccagcagcacctcgtcacgttcacg
gtcaccaacaacctggacattaccgacccgattccggacacgaccttgatcacggtcaac
cgtccgccggcgggtgccgaactgcgcttggtggtcgccggtggcgagagccagagttcc
ggcaccccgacggtgttggatccggacgtggacgacacccacctgttcgagatcgtcgat
ccgcccgagttcgggttgttggaagagtcggacggaacgttcacctacaccgtggctccc
gatcgccacggctccttcgagttcaccttccgagccaccgatccgggtggcttcgaggta
ctgggtcagggcgtcattctggtcctgacctcgaaggtctactccgggctgctggcatcc
tggccggatccgccgatcatcgattgtttgactccgggcgataccgagtgccagaacgac
atcgacaccctgttggagatcgtcaacaatcccgacgtgccgcgcggacgtctcggcaag
cgatctcgggccttcaggctggccggagatcccgccgcaccggtccagattctggcggac
gggcctgtgacttcaaacgtggcgccctttgccgggatggatttggaacttcgggccgcg
atccagcgcgaagtggaagacgatttggacggtgcttggcccggattcctgctgacttcg
gtgccggcctacctgtcgccgcccggatcgcggatcgagcgatggctggcggccgtcccg
ccggacagcgagctcaacgacctgtgcgagcacagcgtgatggcccgctggccgcggttg
ggcatggtgccgcgcgagggcagcaccttcgaccacggcgagacctggtcggcggtgtgc
cgggccgacggcagcggcgaggcttggttcgccctgtacgtaccgtccggggctcacggc
agcctcacggtgcgcgcggtgccccacggtgacgacggcttggacgagcccgtcgtcgag
ctgttcgccggcgaagtgggtcccttcgtcacgcaatgtggcgacttgcgcgccttgggc
tgcagcgaggccggtgccgattcggccgtcacggtccatggcgccgagctgcgtggccgg
gttctgttcgcggtcgtgcgcgggctggaaggccgccaaggcaccttcaccctgttgctg
gaacgtcactga
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