Salinivibrio costicola: HBA18_13035
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Entry
HBA18_13035 CDS
T06511
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
scot
Salinivibrio costicola
Pathway
scot00300
Lysine biosynthesis
scot00470
D-Amino acid metabolism
scot01100
Metabolic pathways
scot01110
Biosynthesis of secondary metabolites
scot01120
Microbial metabolism in diverse environments
scot01230
Biosynthesis of amino acids
Module
scot_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
scot00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HBA18_13035 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HBA18_13035 (lysA)
Enzymes [BR:
scot01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HBA18_13035 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QIR07198
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Position
1:complement(2798697..2799950)
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AA seq
417 aa
AA seq
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MDYFNYQDDGQLWAESLPLTQLADDHGTPLYVYSRATFERHWHAFDRAVGDHPHLVCYAV
KANSNIGVLNVLARLGSGFDIVSQGELERVLVAGGDPAKVVFSGVGKTAAEMRRALEVGI
KCFNVESHSELDRLNQVAGELGVQAPISLRINPDVDANTHPYISTGLKENKFGIAFAEAL
NSFRYAASLPHLKVEGIDCHIGSQLTELAPFIESTDRLLALIDTLGDEGITIRHLDVGGG
LGVTYSDEKPPQPSEYAKALLARLDNHRHLELIFEPGRAIAANAGVLLTKVEFLKHSEHK
NFAIIDAGMNDLIRPSLYQAYQEIIPVVPRQGEPQTYDLVGPVCETGDYLGKDRSLVLEA
GDLLAVRSAGAYGFVMASNYNSRCRPAEVMVDGDQAHLVRERENLASLWQLEQRLPE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttggattatttcaattatcaggacgacggccagctatgggccgaatcattgcctttgacc
cagcttgccgatgatcacggcacacccttgtacgtctattcacgtgcaacctttgagcgc
cattggcacgcgtttgatcgcgccgtgggcgatcatccgcatttggtgtgctatgccgtt
aaggcaaactccaatatcggtgtgttaaatgtgctggcacgcttggggtcaggatttgat
attgtctctcaaggtgaactcgagcgcgtgctcgtcgccggtggtgatcctgcgaaagtg
gtgttttctggcgtggggaaaacggccgcagaaatgcgtcgtgcactggaagtgggcatc
aaatgtttcaatgtggagtcccactctgaactcgaccgcttaaatcaagtcgcgggcgag
ttgggtgtgcaagcgccgatatcgttgcgtattaaccctgatgtagatgccaacacccac
ccctacatctcgacgggcttaaaggaaaataagtttggcattgcctttgcggaggcgttg
aatagtttccgttatgcagccagcttgccacaccttaaggtcgaaggcattgactgtcat
atcggctcgcaactgaccgaactcgcgccttttattgaatctaccgaccgcttgttggcg
ttgattgataccttgggtgatgaaggcattacgattcgtcatctggatgtgggtggcgga
ctgggagtcacctacagtgacgagaagccgcctcagccatctgagtatgccaaagcgttg
ttggcgcgtttggacaatcatcgtcatcttgagctgatttttgagccgggccgtgcgatt
gccgccaatgcgggggtcttgctgaccaaggttgagtttctcaagcacagtgagcacaaa
aactttgccattatcgatgcggggatgaacgatttaattcgtccgtcactgtatcaagcc
tatcaagaaatcattcccgtggtgccgcgccaaggagagccacaaacctatgatttagta
ggaccagtttgcgaaacgggtgattacttgggcaaagaccgctcgctggtgttagaagcg
ggtgatttactggcggtacgctcagccggcgcatatggctttgtgatggcgtcaaactat
aactcacgctgccgccccgccgaggtgatggttgatggcgaccaagctcaccttgtgcgc
gagcgcgaaaacttggcgtcgttatggcagcttgaacagcgcctaccagaataa
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