Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488: SCAT_1838
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Entry
SCAT_1838 CDS
T01646
Name
(GenBank) Exodeoxyribonuclease V
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sct
Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488
Pathway
sct03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SCAT_1838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sct03400
]
SCAT_1838
Enzymes [BR:
sct01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SCAT_1838
DNA repair and recombination proteins [BR:
sct03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SCAT_1838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
HHH_4
AAA_30
UvrD_C_2
SH3_13
HHH_5
Viral_helicase1
AAA_11
AAA_22
Helicase_RecD
PhoH
PIF1
AAA_16
nSTAND3
HHH_2
DEAD
HTH_IclR
UvrD-helicase
AAA
TrwB_AAD_bind
ABC_tran
UvrD_C
DAP3
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
CCB74558
LinkDB
All DBs
Position
complement(1940341..1942629)
Genome browser
AA seq
762 aa
AA seq
DB search
MDPRPPSQPRPQPGKQPQRPPGQGEFRPAVLEAVLERITYANKENGYTVARVDTGRGSGD
LLTVVGALLGAQPGESLRMEGRWGSHPQYGKQFTVENYTTVLPATIQGIRRYLGSGLIKG
VGPRIAERIVSHFGTDTLEVIEQDPARLIEVPGLGPKRTRKIAAAWEEQKAIKEVMVFLQ
GVGVSTSIAVRIYKQYGDASISVVRNEPYRLAADVWGIGFLTADRIAQAVGIPHDSPERV
KAGLQYALSQATDNGNCFLPEERLIADAVKLLQVDTGLVIDCLGELVEAEGVVRERVPDP
DGGDAIRAVYLVPFHRAEISLAGQVLRLLRGPEDRMPAFRDVAWDKALAWLRDRTGAELA
PEQEQAVRLALTEKVAVLTGGPGCGKSFTVKSVVTLARAKKAKVVLAAPTGRAAKRLAEL
TGAEASTVHRLLELKPGGDAAYDRDRPLDADLVVVDEASMLDLILANKLVKAVPPGAHLL
FVGDVDQLPSVGAGEVLRDLLAEGSPVPAVRLTRIFRQAQQSGVVTNAHRINSGLPPVTQ
GLADFFLFPEEDTEEAGRLTVDVVARRIPAKFGLDPRRDVQVLAPMHRGPAGAGVLNGLL
QQAVTPGRPDLPERRFGGRVFRVGDKVTQIRNNYDKGANGVFNGTVGVVTALDNDEHRLT
VRTDEDEEVGYDFDELDELAHAYAVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVT
RAKRLVVLVGSRRALAQAVRTVSAGRRFTALDHRLRGAVRES
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggatccgcgaccgccgtcacaaccccgcccgcagccggggaagcagccgcaacggccc
ccgggccagggcgagttccgccccgccgtcctggaggccgtgctggaacgcatcacgtac
gccaacaaggagaacggctacacggtggcccgcgtcgacaccggccgcggctcgggcgac
ctgctcaccgtcgtcggcgccctgctcggcgcgcagcccggcgaatccctgcgcatggag
ggccgctggggctcccacccgcagtacggcaagcagttcaccgtggagaactacaccacc
gtcctgcccgccaccatccagggcatccgccgctacctgggctccgggctgatcaagggg
gtcggcccgcgcatcgccgagcgcatcgtctcccacttcggcaccgacaccctggaggtg
atcgagcaggacccggcccgcctcatcgaggtccccggcctcggccccaaacgcaccagg
aagatcgccgccgcctgggaggagcagaaggcgatcaaggaagtgatggtcttcctccag
ggcgtgggcgtctccacctcgatcgcggtgcgcatctacaagcagtacggcgacgcctcg
atctccgtggtgcgcaacgagccctaccgcctcgccgccgacgtgtggggcatcggcttc
ctcaccgccgaccgcatcgcccaggccgtcggcataccgcacgacagcccggagcgggtc
aaggccgggctccagtacgcgctctcccaggccaccgacaacggcaactgcttcctgccc
gaggaacgcctcatcgccgacgccgtcaaactcctccaggtcgacaccgggctggtcatc
gactgcctgggggagctggtcgaggccgagggggtggtccgggagcgggtgccggatccg
gacggcggtgacgcgatccgcgcggtctacctggtgcccttccaccgcgccgagatatcg
ctggccggccaggtgctgcggctgctgcgcggcccggaggaccggatgcccgccttccgc
gacgtggcctgggacaaggcgctggcctggctgcgcgaccggaccggcgccgagctcgcc
ccggagcaggagcaggcggtgcggctggcgctcaccgagaaggtcgcggtgctcaccggc
ggccccggctgcggcaagtcgttcaccgtgaaatcggtggtgaccctggcccgggccaag
aaggccaaggtggtgctggccgccccgaccgggcgggccgccaagcggctggccgagctg
accggggcggaggcgtccaccgtccaccggctgctggagctcaagcccggcggtgacgcc
gcctacgaccgcgaccgcccgctcgacgccgacctggtcgtggtcgacgaggcgtccatg
ctcgacctgatcctcgccaacaagctggtcaaggcggtgccgccgggggcccacctgctc
ttcgtgggcgatgtcgaccagctgccgagcgtgggcgcgggagaggtgctgcgcgacctg
ctggccgagggcagtccggtgcccgcggtgcggctcacccggatcttccgccaggcccag
cagtccggggtggtcaccaacgcccaccggatcaactccgggctgccgccggtcacccag
gggctcgccgacttcttcctcttccccgaggaggacaccgaggaggccgggcggctcacg
gtggacgtggtggcgcggcgcatcccggccaagttcggcctcgacccgcgccgcgacgtc
caggtgctcgccccgatgcaccgcggaccggccggcgccggggtgctcaacgggctcctc
cagcaggcggtcacccccggccgccccgacctgcccgagcgccgcttcggcggccgggtc
ttccgggtcggcgacaaggtcacccagatccgcaacaactacgacaaaggcgccaacggt
gtcttcaacggcacggtcggcgtggtcaccgcgctcgacaacgacgaacaccggctcacc
gtgcgcaccgacgaggacgaggaggtcggctacgacttcgacgaactggacgaactggca
catgcctacgcggtgaccatccaccgttcccagggcagcgagtatcccgccgtggtgatc
ccggtcaccacgggcgcctggatgatgctccagcgcaatctgctctatacggccgtgacc
cgggcaaagcggttggtggttctggtcggctcacggcgggcactcgcacaggcggtacgc
accgtttccgcaggccgacgcttcaccgcactcgatcaccggctgcgcggcgcggtgcgg
gagagctga
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