KEGG   Sorangium cellulosum So0157-2: SCE1572_21330Help
Entry
SCE1572_21330     CDS       T02718                                 

Definition
(GenBank) hypothetical protein
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
scu  Sorangium cellulosum So0157-2
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:scu00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    SCE1572_21330
Enzymes [BR:scu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     SCE1572_21330
DNA repair and recombination proteins [BR:scu03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     SCE1572_21330
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(6020253..6022316)
Genome map
AA seq 687 aa AA seqDB search
MDGPRSSAAKGPTDGAAAAPRRTLTYADALEGARRGPFPDEVEPQLATLVTGPPQGDGWL
YEVKFDGYRMLAQLRGGRVTLLTRRGQDWTERFASVRDDLARLPAREAVLDGEIVIVGPD
GVTDFQALQNALSDGNDGREGRLMYFVFDLLYLDGRDLRDCAQVTRKRALEALLEEAPEE
GTLRYTEHLEEDGAAVFQHACKLGIEGVIAKRPEAPYRSGRGSSWLKVKCGKRQEFVIVG
FTEPTGARQGLGAILVGVNRSGKLAYAGKVGTGFTNKTRTTLRSRLESIERAKPAFAGAP
RMRGVHWVEPELLAEVQFSAWTRDGRLRHPSFEGLREDRTPESVTVEREQPPPAPPPRKA
AGAPSKAVSAARSKGAIEAPGKAPRGGRGGAERIEVAGTRLTNPDKVLYPAQGITKLALA
GYYAQIAEHMLPYVAKRLLTLVRCPAGQGKPCFFQRHEAEGLSEAIRRTLVEEDDGTRTY
LYIENTEGLVSLVQMGALEMHIWGSRVDRIEQPDMMVFDLDPAPELPWERVAEAAKTVRH
LLETLGLRSFVKTTGGKGLHVVVPIEARRRWDEVKPFTKAVADALVRFDPARYIATLSKA
KRTGKVFVDYLRNGRGATAVAPYSTRARPGAAVATPLSWDELDAPLDPASFTIETVPQRL
AAIADPWAELPTVRQSITSAMMKQVGL
NT seq 2064 nt NT seq  +upstreamnt  +downstreamnt
gtggacggcccgcgctcgtccgccgcgaagggaccaacggacggcgccgccgcagccccg
cgccggacgctgacctacgcggatgcgctcgaaggcgcccggagagggccgttcccggac
gaggtcgaaccccagctcgcgacgctcgtcaccgggcccccgcagggcgacgggtggctc
tacgaggtcaagttcgacggctaccggatgctcgcgcagctccgcggcggccgcgtgacg
ctcctgacccgccgcggccaggactggaccgagcggttcgcgagcgtgcgcgacgacctc
gctcggttgccagcccgcgaagccgtgctggacggcgaaatcgtcatcgtcgggcccgac
ggcgtgaccgatttccaggcgctgcagaacgcgctcagcgacggaaatgacgggcgcgag
gggcgcctgatgtacttcgtgttcgacctgctctacctggacggccgcgatctccgcgac
tgcgcgcaggtcacccgcaaacgggcgctcgaggcgctgctggaggaagcgccggaggaa
gggaccctgcgctacacggagcacctcgaggaggacggcgccgccgtgttccagcacgcg
tgcaagctcgggatcgagggcgtcatcgcgaagcgcccggaggctccctaccggagcggg
cgcgggagcagctggctcaaggtgaagtgcggcaagcgccaggagttcgtgatcgtcgga
ttcaccgagccgaccggggcccgccaggggctcggggccatcctcgtcggcgtgaacagg
tcaggcaagctcgcctacgccggcaaggtgggcacgggcttcacgaacaagacgcgcacg
accctgcgcagccgtctcgagtcgatcgagcgcgccaagccggcctttgcaggggcgccg
cgcatgcgcggcgtccactgggtcgagcccgagctcctcgccgaggtccagttctccgcc
tggacgcgcgacgggcggctgcggcacccgtcgttcgagggcctccgcgaggaccgcacc
ccggagtcggtcaccgtcgagcgcgagcagcccccgccggcgccgccgccccgcaaggcg
gccggcgcgccgagcaaggcggtgagcgcggccaggagcaagggagcgatcgaggcgccg
ggcaaggcccctcgcggcggccgaggcggcgccgagaggatcgaggtcgcgggaacgcgg
ctgacgaaccccgacaaggtgctctatccggcgcaggggatcacgaagctcgctctcgcc
gggtattacgcgcagatcgccgagcacatgctgccctacgtcgctaagcggctgctcacg
ctcgtccgctgccccgcgggccagggcaaaccctgcttctttcagaggcacgaggccgag
gggctctcggaggccatccgtcggacgctcgtcgaagaggacgatggaacacgaacctat
ctctacatcgagaacaccgaagggcttgtgtcgctcgtgcagatgggggcgctcgagatg
cacatctgggggagccgcgtcgaccggatcgagcagccggacatgatggtcttcgacctc
gacccggcgccggagctcccgtgggagcgcgtggccgaggccgcgaagaccgtgcggcac
ctcctggagacgctggggctgcggagcttcgtcaagacgaccggcggcaaaggcctccac
gtggtggtcccgatcgaggcgcgcaggcgctgggacgaggtgaagccgttcacgaaggcc
gtggccgacgcgctcgtgcgcttcgatccggcgcggtacatcgcgacgctctcgaaggcc
aagcgcaccggcaaggtcttcgtcgactacctgcggaacgggcgcggcgcgaccgccgtg
gcgccgtactcgacccgcgcgcgccccggcgcagccgtggcgacgccgctctcgtgggac
gagctcgacgcgccgctcgatcccgcctcgttcaccatcgagaccgtgccgcagcgcctc
gcggccatcgcagatccgtgggccgagctcccgaccgtgcggcagtccatcaccagcgcc
atgatgaagcaggtcgggctctga

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