KEGG   Streptomyces cyaneogriseus: TU94_01705
Entry
TU94_01705        CDS       T03687                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
scw  Streptomyces cyaneogriseus
Pathway
scw03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:scw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    TU94_01705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:scw03400]
    TU94_01705
Enzymes [BR:scw01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     TU94_01705
DNA repair and recombination proteins [BR:scw03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     TU94_01705
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C DNA_ligase_OB_2 RNA_ligase
Other DBs
NCBI-ProteinID: AJP00430
UniProt: A0A0C5FVF9
LinkDB
Position
401619..402599
AA seq 326 aa
MDLPLIPPMLATPGSLPPAAQDARWAYETKQDGQRVVVYLPGDGSLLLRARSGQDITPAY
PELSPLATVLGTTPAVLDGEVLALDARGRASFQLLQSRMGLAHAPGRAARRAAAVPVHLV
LFDVMHLAGRSLVPLPYARRREELEGLELDGPSWSTPAALVGHGERALRATREHGLEGLV
CKRLDSVYEPGVRSRAWIKIRNMNSEDVVVGGWLPGKGRLSGLPGAVLVGQRAGGRLRYV
GGVGTGWSEAERAELAALLHAAATEVCPFDPVPRVPGARWVVPRLVGEVRYSTRTREGML
RQPSWLRLRPDLAPEESAADLPDDLA
NT seq 981 nt   +upstreamnt  +downstreamnt
gtggacctgccgctcatccccccgatgctcgccacgcccggctccctgccgcccgccgcg
caggacgcgcggtgggcctacgagaccaagcaggacggccagcgcgtggtggtctacctg
cccggcgacggaagcctgctgctgcgcgcccgctccggccaggacatcacgcccgcctac
ccggagctgtccccgctggccaccgtgctcggcaccacccccgccgtactggacggggag
gtcctggcgctggacgcgcgggggcgcgcgagcttccagctcctccagtcccggatgggg
ctggcccacgcccccggccgggcggcccggcgggcggcggcggtccccgtgcacctcgtg
ctgttcgacgtgatgcacctggcggggcgctccctcgtccccctcccctacgcgcgccgg
cgcgaggaactggaggggctggagctggacggcccctcctggtcgacgcccgcggcgctc
gtcgggcacggcgagcgggccctgcgcgccacccgcgagcacgggctggagggcctggtg
tgcaagcggctggactccgtgtacgagcccggggtgcgctcccgggcgtggatcaagatc
cgcaacatgaacagcgaggacgtggtcgtcggcggctggctgcccggcaagggacggctc
tcgggcctgccgggcgccgtgctggtcggccagcgggccggggggcggctgcggtacgtc
ggcggggtgggcaccggctggagcgaggccgagcgtgcggaactggccgcgctgctgcac
gccgccgcgaccgaggtgtgccccttcgatcccgtcccacgggtgccgggggcgcgctgg
gtggtgccccggctggtcggcgaggtccgctacagcacccgcacccgggaggggatgctg
cggcagccgtcctggctgcggctgcgtcccgacctggcgccggaggagtcggcggccgac
ctcccggacgacctggcctga

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