Streptomyces sp. CdTB01: AS200_00955
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Entry
AS200_00955 CDS
T04240
Name
(GenBank) AfsR family transcriptional regulator
Organism
scx
Streptomyces sp. CdTB01
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Gene cluster
GFIT
Motif
Pfam:
BTAD
TPR_12
TPR_1
TPR_2
NB-ARC
TPR_8
TPR_MalT
Trans_reg_C
TPR_10
AAA_16
TPR_7
RPN7
AAA_22
TPR_4
NACHT
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
ALV30821
UniProt:
A0A0U3PGQ1
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All DBs
Position
248654..251704
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AA seq
1016 aa
AA seq
DB search
MSDAEAGSLRFNVLGPLEGWADGSRLRLGGLIQERVLGTLLLEPGRVLPISRLVESAWAE
NPPATASHQVRKAIAYLRRRIPDGGEVIVTDGPGYRAVLTPEQLDLTEFALLVKTARNAM
GEGRPGEAAEALRRALGLWRGPILSGAGGPVIEAAATAFEERRLAAAEYLFELRLGFGES
SELVVDLRDFVRSHPLRETLRAQLMLALYRAGRQAEALEEYGRVRELLVEELGVDPGPGL
TRVYEGILREDPKLAAPPPSPPAPVPAPAPASPPAAVPAAPADALCTLPYDLADFTGRER
ELTELLDCAGRDYARHSRIVALDGMGGSGKTSLAVHAAHQLADAFPDGQLYIDLRGYTPG
EEPVTAGGALDSLLRALGIPGERIPEDLAGRTALWRATITGRRLLLLLDNAADADGVRPL
MPTGPGCLVLVTSRARLVDLDSAHWISVDVMSPQECAKLVAETLGEQRYAAEPEAAAELA
RLCGHLPLALRIATARLRNRPRWTLRYLADRLRDEARRLDELSSGQRSVAATLRLSYQAL
DQECRTAFRILALHPRGDIDVHAAAALLGTDPRDAEDILELLLDVHLMQQPEIGLYTFHD
LVRSFAHSLRSEATEGDDDASVHRLLDYYLTAAESACQVMFPGRRQIPTGREETGVPVPR
FAGRGQAEQWFAREQGALLGMVGVARRLGCDRHTVLLTRNLAFQLSARGQLEEFRTMGLE
AVSAARRLGELPLLGVSLSNLGVACWKLGRFTEAVEIATEGRDVAEQLGDLQTMAHSEST
LGQLNSLLGHFPQALSHLEKSIAYERRLGASRAEAESLTLLSTLYEQWGRHEEAAAAARR
AITLCDELGRHENKLVALTDLAFAQACLGDDEAAEVSLKQARALCEDNRDPGQVALTSAL
SAEVCHRLGRTERAAEFGEHALNTVSSNVSPLRRAKVENTVGRYLLRRGDAAPALSLHER
AYELAGSLDFRIEMAYAHSGIARAQTALGRSEEADRHERSAEELFTAMGVPAGRRR
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgccgaggcgggttcactgcgcttcaatgtgctcggcccactggagggctgg
gcggacggatcccggctccggttgggcggactcatccaagaacgtgtactgggcaccctg
ttactggagcccggccgcgtgctgcccatcagccgtctcgtggagtccgcatgggcggag
aacccgcccgccaccgcctcccaccaagtacgcaaggccatcgcctacctgcggcggcgc
atcccggacggcggcgaggtcatcgtcaccgacggccccggctaccgggcggtgctcacc
cccgagcagctggacctcaccgagttcgcgctgctggtgaagacggccagaaacgccatg
ggcgagggccggccgggcgaggcggccgaggcgctgcgccgggcgctcggcctgtggcgc
gggccgatcctgtccggggccggcggtcccgtgatcgaggcggcggccaccgcgttcgag
gaacgccgcctcgccgccgccgagtacctcttcgagctgcggctcggcttcggcgagagc
agcgaactcgtcgtggacctgcgggacttcgtacggagccacccgctgcgcgagacgctg
cgcgcccagttgatgctggcgctgtaccgggcgggccggcaggcggaggccctggaggag
tacggccgggtccgcgaactcctggtggaggaactgggcgtggaccccggccccggtctg
acccgggtgtacgagggcatcctgcgcgaggacccgaagctggccgctccccctccctca
cctcccgcccccgttcccgctccggcaccggcgtccccgcccgctgcggtaccggccgcg
cccgcggacgcgctctgcacgctgccgtacgacctggcggacttcaccggccgggagcgg
gagctgaccgagttgctggactgcgcgggacgggactacgcgcgtcactcgcggatcgtg
gccctggacggcatgggcggcagcggcaagacctcgctcgccgtccacgccgcgcaccag
ctggccgacgccttccccgacggccagctctacatcgacctgcgcggctacacccccggc
gaggagccggtcaccgcgggcggagcactggacagtctgctgcgcgccctggggataccg
ggcgagcgcatccccgaggacctcgcgggccgcacggcgctgtggcgggcgacgatcacc
ggccggcgcctgctgctcctgctggacaacgccgccgacgccgacggcgtacggccgttg
atgccgaccgggccgggctgcctggtcctggtcaccagccgggcccggctggtggacctg
gactccgcacactggatctccgtcgatgtgatgtcgccccaggagtgcgcgaagctggtc
gcggagaccctgggcgagcagcgctacgccgccgagccggaggccgccgccgaactggcc
cggctgtgcggccatctgcccctcgcgctgcgcatcgccaccgcccggctgcgcaaccgc
ccccgctggaccctgcgttacctggccgaccggctgcgcgacgaggcacggcggctggac
gagctcagttccggccagcgcagtgtcgccgccaccctgcggctgtcgtaccaggccctg
gaccaggagtgccggaccgcgttccgcatcctggcgctgcacccgcgcggcgacatcgac
gtgcacgccgccgccgcgctgctgggcaccgacccccgggacgccgaggacatcctggaa
ctgctgctggacgtgcacctgatgcagcagccggagatcggcctctacaccttccacgac
ctggtgcgcagcttcgcgcacagcctgcgctccgaggccacggaaggcgacgacgacgcc
tcggtgcaccggctgctcgactactacctgacggcggccgagtcggcgtgccaggtgatg
ttccccggccgccgccagatccccaccggccgcgaggagacaggcgtgccggtaccgcgc
ttcgccgggcgcgggcaggccgagcagtggttcgcgcgggaacagggggcgctgctgggc
atggtcggcgtggcccggcggctggggtgcgatcggcacaccgtgctgctgacccgcaac
ctggccttccagctcagcgcccgcgggcagctggaggagttccgcacgatgggcctggag
gcggtgtcggccgcgcgacggctcggcgaactgccgcttctcggcgtcagcctgtccaac
ctgggcgtggcctgctggaaactaggacggttcaccgaggccgtcgagatcgccaccgag
ggccgggacgtcgccgagcagctgggcgacctgcagaccatggcgcacagcgaaagcacc
ctgggacagctcaacagcctgctcgggcacttcccgcaggcgctgtcccacctggagaag
tccatcgcctacgagcgccggctgggggcgagccgtgcggaggcggagagcctgacgctg
ctcagcacgctgtacgagcagtggggccggcacgaggaggccgcggcggccgcccgccgg
gcgatcaccttgtgcgacgagttggggcggcacgagaacaagctcgtcgcgctgaccgac
ctggcgttcgcgcaggcctgtctcggcgacgacgaggcggccgaggtgagtctgaagcag
gcccgcgcgctgtgcgaggacaaccgggaccccggtcaggtggctctgacctccgcgctg
tcggcggaggtctgccaccggctgggccgtaccgaacgggccgccgagttcggggagcac
gcactgaacacggtcagctcaaacgtttctcctctgcgccgcgccaaggtcgagaacacc
gtcggccgctatctgctgcggcgcggtgacgccgcgcccgccctgtccctgcacgagcgg
gcgtatgagctggccggctcgctggacttccgcatcgagatggcctacgcccactccggc
atcgcccgcgcgcagacagccctcggccggagcgaggaggcggaccggcacgagcggtcc
gcggaggagctgttcaccgcgatgggcgtgccggccggccggcgccgctga
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