Streptomyces cyanogenus: S1361_27315
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Entry
S1361_27315 CDS
T07416
Symbol
gmr2
Name
(GenBank) Cyclic di-GMP phosphodiesterase Gmr
Organism
scyg
Streptomyces cyanogenus
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_4
PAS_3
PAS
PAS_9
MASE5
PAS_8
PAS_11
Motif
Other DBs
NCBI-ProteinID:
QTE01073
LinkDB
All DBs
Position
6039832..6042843
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AA seq
1003 aa
AA seq
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MSAPPSVTTTLDGAVRAPHPHEAPPPRRAAATDCNRLREQLVLALVCAAYAVGAAFDWGT
TEVALVMGDFGLSAAAGAAAVSCFLYARNRRVRFRSAWLLFALSSTMAALGNAVWGWYEV
VLDRPVPSPSYADLFFLCFAPPAIVGLLVLAKRPATRAGWICLGLDAWLIGGSLLTLSWS
LALAQAARIDGSSVAHAALSLAYPLLDIVLVSMVLALHFRRAPGNRTAVNTAIGALALTV
MCDALFTSPLLHSSYHSGQLLDAGWFAGSLLLAYAPWAAPRRGSAQEARAADGHTRVVHE
HVPGQRSAGHHPPLPPAPGGEHSRYPAGRPLTGSLAALTPYLAAAVCTLGILYNVLNGRR
PDHVVLITAGAVVLALVMRQGIMLLDNITLTQELAQKENHFRSLVQGSSDVIMIAAPNGI
LRYVSPAAAGVYGRPAEELVGTELAALIHPEDLGCVVHEVRRFLAASPLEEPTTRIECRF
RSGDGGWLNVESTVNRHHGGLIFNSRDVTERVRLQAQLQHNAEHDPLTDLPNRALFTKRV
QQALSGRRATDRGAALRGTAVLFIDLDGFKAVNDTIGHQAGDELLIQAARRLQDAVRQGD
TASRLGGDEFAALIVGDGTRDRAARERNIMELADRLRATLSQPYAIDGNDVRVNASIGVA
FAEPGLGAGELLRNADLAMYRAKSAGKGRVELYRPQMQQDVVRKAELATRLRAALHDGEF
ALLHQPVVCLENGRITAVCAQARWRSSQGVLFTPAEFLRVAEDGDKTAELDRWILEEAVA
QAAERAATGVAVPVAVRMGARRLLDRSTPLGSVEALLTRHGLPPGALVVELSDTDPRVSL
DELERRLTALSRLGVRIALDGFGSGYAAITALRRLPVDILKLDRSLVEGVVESARLHKIT
SGLLRIAGDLGLQSVAEGVDLPEQVAALRAMGCTHGQGMAFAGPLDEYRLRRALGSGHYP
VPHAPAEPAFAGKAAAVYTGGVPAVLGGGSALRSHSETPVPPT
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgccccgccctctgtgacgaccaccctcgacggagcggtgcgcgcaccgcacccg
cacgaggcgccgccgccccgccgggcggccgccaccgactgcaaccggctgcgggagcag
ctcgtcctcgccctggtctgcgcggcctacgccgtcggagccgcgttcgactggggcacg
accgaagtcgcgctggtcatgggcgacttcggcctgagcgccgcggccggcgccgccgcc
gtctcctgcttcctgtacgcccgcaaccggcgcgtgcgcttccgctcggcctggctgctg
ttcgccctctcctcgaccatggccgcgctgggcaacgcggtctggggctggtacgaggtg
gtgctggaccggcccgtgcccagccccagctacgccgacctgttcttcctgtgcttcgcg
ccgcccgccatcgtcggcctgctggtgctcgccaagcggccggcgacgcgggcgggctgg
atctgcctgggcctggacgcctggctcatcggcggctcgctgctcaccctgtcgtggagc
ctcgcgctcgcccaggcggcccggatcgacggctccagcgtggcgcacgccgcgctgtcc
ctggcgtacccgctgctggacatcgtgctggtcagcatggtcctcgcgctgcacttccgc
cgtgcccccggcaaccgcacggcggtgaacaccgcgatcggcgcgctcgcgctgaccgtg
atgtgcgacgccctgttcacctcgccactgctgcacagcagctaccactccgggcagctg
ctggacgcgggctggttcgccggttcgctgctgctcgcctacgccccctgggccgccccc
cggcgcggcagcgcccaggaggcgcgcgcggcggacggccacacgcgcgtggtccacgag
cacgtgccgggccagcggagcgcgggccaccacccgccgctcccgcccgcgcccggcggc
gagcacagccggtacccggccggccgcccgctcaccggctccctcgccgccctcacgccg
tacctcgccgcggccgtgtgcaccctgggcatcctgtacaacgtcctcaacggccgcagg
cccgaccacgtggtgctgatcaccgcgggcgccgtggtgctggcgctcgtcatgcggcag
ggcatcatgctgctggacaacatcaccctcacccaggaactggcccagaaggagaaccac
ttccgctccctggtgcagggctccagcgacgtcatcatgatcgccgcgccgaacggcatc
ctccggtacgtctccccggccgccgccggggtctacggccggcccgccgaggaactcgtg
ggcaccgagctggccgcgctcatccatccggaggacctgggctgcgtggtgcacgaggtg
cgccgcttcctcgccgccagcccgctggaggagcccaccacgcgcatcgagtgccgcttc
cgctccggcgacggcggctggctcaacgtcgagtcgaccgtcaaccggcaccacggcggt
ctgatcttcaacagccgggacgtgaccgagagggtgcgcctccaggcacagttgcagcac
aacgccgagcacgacccgctgacggacctgcccaaccgcgcgctgttcaccaagcgcgtg
cagcaggccctgtccggccgccgggccaccgaccggggcgccgccctgcgcggtacggcg
gtgctcttcatcgacctggacggcttcaaggccgtcaacgacacgatcgggcaccaggca
ggcgacgagctgctcatccaggccgcccgtcggctccaggacgccgtccggcagggcgac
accgcgtcccggctgggcggcgacgagttcgcggccctgatcgtcggggacggcacccgg
gaccgtgccgcccgggagcggaacatcatggagctcgccgaccgcctcagggcgaccctc
tcccagccgtacgccatcgacggcaacgatgtccgggtcaacgcctccatcggcgtcgcc
ttcgccgaacccggcctgggcgcgggcgagctgctgcgcaacgccgacctggcgatgtac
cgcgcgaagtcggccggaaagggccgggtcgagctgtacaggccgcagatgcagcaggac
gtcgtccgcaaggccgaactggccacgcgcctgcgcgccgcgctgcacgacggcgagttc
gcgctgctgcaccagcccgtggtgtgcctggagaacggccggatcacggcggtctgcgcg
caggcgcgctggcgctcctcgcagggggtgctgttcacgcccgccgagttcctgcgggtg
gccgaggacggcgacaagaccgccgagctggaccgctggatcctggaggaggccgtggcg
caggcggccgagcgggccgcgaccggggtcgccgtgccggtggcggtgcggatgggcgcc
cggcggctgctggaccgttcgacgccgctgggctcggtggaggcgctgctgacccggcac
gggctgccgccgggggcgctggtggtcgagttgtccgacaccgacccgcgggtctcgctg
gacgagctggagcggcggctgaccgcgctgagccggctcggggtgcggatcgcgctggac
ggcttcggcagcggttacgcggccatcacggcgctcaggcggctgcccgtggacatcctc
aagctcgaccgcagtctggtcgagggcgtggtcgagtccgcgcggctgcacaagatcacc
agtggtctgctgcggatcgcgggcgatctcgggctccagtcggtcgccgagggcgtggat
ctgcccgagcaggtggcggcgctgcgcgcgatgggctgcacccatggacagggcatggcg
ttcgccggtccgctggacgagtaccggctgcgccgggcgctcggatccggccactatcca
gtgccgcacgccccggccgaaccggcgttcgcggggaaggcggcggcggtgtacacaggg
ggtgttcccgccgtcctcggaggcggcagcgcccttcgttcacattctgagacgcccgtc
ccacccacttga
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