KEGG   Streptomyces cynarae: N8I84_28835
Entry
N8I84_28835       CDS       T09435                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
scyn  Streptomyces cynarae
Brite
KEGG Orthology (KO) [BR:scyn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:scyn03016]
    N8I84_28835 (truB)
Enzymes [BR:scyn01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     N8I84_28835 (truB)
Transfer RNA biogenesis [BR:scyn03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    N8I84_28835 (truB)
 Prokaryotic type
    N8I84_28835 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C TruB_C_2 PseudoU_synth_2 DKCLD
Other DBs
NCBI-ProteinID: UXY22255
LinkDB
Position
unmamed1:6328420..6329325
AA seq 301 aa
MTQQHTTPDGLVIVDKPSGFTSHDVVAKMRGIARTRRVGHAGTLDPMATGVLVLGVEKAT
KLLGHLALTEKEYVGTVRLGQTTVTDDAEGEVTSSTDASKVTRDAIDAGIAKLTGDIMQV
PSKVSAIKINGVRSYKRARDGEDFDIPARPVTVSSFAVYDVRDAVAEDGTPVLDLLVSVV
CSSGTYIRALARDLGADLGVGGHLTALRRTRVGPYKLDAARTLEQLQQELTVMPIAEAAA
AAFPRWDVDAKRARLLANGVRLEMPDEYAGAGPVAVFGPEDRLLALVEAHRGKAKSLAVF
G
NT seq 906 nt   +upstreamnt  +downstreamnt
atgacccagcagcacaccacgcccgacggcctcgtcatcgtcgacaagccgtcgggcttc
acttcgcacgacgtcgtcgccaagatgcgcgggatcgccaggacccgtcgcgtcggccac
gccggcaccctcgacccgatggcgaccggcgtcctcgtcctcggcgtggagaaggccacc
aagctcctcggccacctcgcactcaccgagaaggagtacgtgggcaccgtccgcctcggg
cagacgacggtcaccgacgacgccgaaggggaggtcacctcctccaccgacgcctccaag
gtcacccgggacgccatcgacgccgggatcgccaagctgaccggcgacatcatgcaggtg
ccgtccaaggtcagcgccatcaagatcaacggcgtacggtcgtacaagcgggcccgggac
ggcgaggacttcgacatcccggcccggccggtcaccgtctcgtccttcgcggtgtacgac
gtccgggacgccgtcgccgaggacggcaccccggtgctcgacctgctggtgtccgtggtc
tgctcgtccggcacctacatccgggccctcgcccgcgacctcggtgctgacctgggcgtc
ggcggccacctcaccgcgctgcgccgcacccgggtggggccgtacaagctggacgccgcc
cgcaccctggagcagctccagcaggagctgaccgtgatgccgatcgccgaggccgccgcg
gccgccttcccgcgctgggacgtggacgccaagcgggcccggctgctcgccaacggcgtg
cggctggagatgcccgacgagtacgcgggcgcgggccccgtcgccgtcttcggccccgaa
gaccgcctcctggcgctcgtggaggcccaccgggggaaggcgaagagcctggccgtgttc
ggctga

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