Streptomyces sp. CFMR 7: ABE83_08810
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Entry
ABE83_08810 CDS
T04074
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
scz
Streptomyces sp. CFMR 7
Pathway
scz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABE83_08810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scz03019
]
ABE83_08810
03016 Transfer RNA biogenesis [BR:
scz03016
]
ABE83_08810
Enzymes [BR:
scz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ABE83_08810
Messenger RNA biogenesis [BR:
scz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ABE83_08810
Transfer RNA biogenesis [BR:
scz03016
]
Prokaryotic type
tRNA degradation factors
ABE83_08810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
RNase_PH_C
KH_2
KhpA-B_KH
PCB_OB
Cauli_AT
Motif
Other DBs
NCBI-ProteinID:
ALC27172
UniProt:
A0A0M4DQQ5
LinkDB
All DBs
Position
complement(2252103..2254316)
Genome browser
AA seq
737 aa
AA seq
DB search
MENETHYAEAVIDNGTFGTRTIRFETGRLAKQAAGSAVAYLDDDTMVLSATTASKRPKDN
LDFFPLTVDVEERQYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQI
VETIMALNPDHLYDVVAINAASCSTQLAGLPFSGPIGATRVALIKGQWVAFPTHTELEDA
VFDMVVAGRVLDDGDVAIMMVEAEATEKTIQLVKDGAEAPTEEIVAAGLEAAKPFIKALC
KAQSDLASKAAKPVGDFPVFLDYQDDVLDALAKAVTPELKQALTIAGKQERETELDRVKE
IAAEKLLPEFEGREKEISAAYRALTKKLVRERVIKDKVRIDGRGVTDIRTLAAEVEAIPR
VHGSALFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSVGETGRVGSP
KRREIGHGALAERAIVPVLPTREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAGVP
LKAAVAGIAMGLISQEIDGKTHYVALTDILGAEDAFGDMDFKVAGTKQFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMNEAIDVPDEMSPNAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGADITIEDDGTIYIGAQQGSQAEAARATINAIANPTMPEVGERYLGTVVK
TTTFGAFVSLMPGKDGLLHISQIRKLAGGKRVENVEDVLGVGAKVQVEIAEIDSRGKLSL
IPVIEGEEDEKKDDTDK
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaggccgtcatcgacaacgggacgttcggcacccgc
accatccgcttcgagacgggccgcctggccaagcaggccgccggctccgccgtcgcgtac
ctggacgacgacaccatggtgctgtcggccaccaccgcctccaagcggcccaaggacaac
ctggacttcttccccctcacggtggacgtcgaggagcggcagtacgccgcaggcaagatc
cccggctccttcttccgccgggagggccgcccctccgaggacgcgatcctcacctgccgc
ctgatcgaccgcccgctgcgcccgtccttcaagaagggcctgcgcaacgagatccagatc
gtcgagacgatcatggcgctcaaccccgaccacctgtacgacgtggtcgcgatcaacgcc
gcctcctgctccacccagctcgcgggcctgcccttctccggcccgatcggcgccacccgc
gtcgccctgatcaagggccagtgggtcgccttcccgacccacaccgagctcgaggacgcc
gtcttcgacatggtcgtcgccggccgtgtcctggacgacggcgacgtcgcgatcatgatg
gtcgaggccgaggccaccgagaagaccatccagctcgtcaaggacggcgccgaggctccc
accgaggagatcgtcgccgccggtctggaagccgcgaagcccttcatcaaggcgctctgc
aaggcccagtcggacctggcgtccaaggccgccaagcccgtcggtgacttcccggtcttc
ctggactaccaggacgacgtcctggacgccctggccaaggccgtcacgcccgagctgaag
caggcgctcaccatcgccggcaagcaggagcgcgagaccgagctggaccgcgtcaaggag
atcgccgccgagaagctcctcccggagttcgagggccgcgagaaggagatctccgccgcc
taccgcgcgctgaccaagaagctggtccgcgagcgcgtcatcaaggacaaggtccgcatc
gacggccgtggcgtcacggacatccgtacgctcgccgccgaggtcgaggccatcccgcgc
gtgcacggctcggcgctcttcgagcgtggcgagacccagatcctgggcgtcaccaccctc
aacatgctccgcatggagcagcagctggacaccctctccccggtgacccgcaagcgctac
atgcacaactacaacttcccgccgtactccgtcggtgagaccggccgcgtgggctcgccc
aagcgccgcgagatcggccacggtgcgctcgccgagcgcgccatcgtgccggtcctgccg
acccgcgaggagttcccgtacgcgatccgccaggtctccgaggcgctgggctccaacggc
tcgacgtccatgggctcggtctgcgcctccaccatgtcgctgctgaacgccggtgtgccc
ctcaaggccgccgtcgccggtatcgccatgggcctgatctcgcaggagatcgacggcaag
acccactacgtcgccctcaccgacatcctcggtgcggaggacgccttcggtgacatggac
ttcaaggtcgccggtaccaagcagttcgtgaccgcgctccagctcgacaccaagctcgac
ggcatccccgcctcggtcctggccgccgcgctgaagcaggcccgtgacgcgcgtctgcac
atcctggacgtcatgaacgaggccatcgacgtcccggacgagatgtccccgaacgccccg
cggatcatcaccgtcaagatcccggtggacaagatcggtgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacaccggcgccgacatcacgatcgaggacgacggc
acgatctacatcggtgcgcagcagggctcgcaggccgaggccgcccgcgccacgatcaac
gccatcgccaacccgaccatgccggaggtcggtgagcgctacctgggtacggtcgtcaag
acgaccaccttcggcgcgttcgtctcgctcatgccgggcaaggacggcctgctgcacatc
tcgcagatccgcaagctcgccggtggcaagcgcgtggagaacgtcgaggacgtgctcggc
gtcggcgccaaggtccaggtcgagatcgcggagatcgactcccgcggcaagctctccctc
atcccggtcatcgagggtgaagaggacgagaagaaggacgacaccgacaagtga
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