Saccharophagus degradans: Sde_0850
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Entry
Sde_0850 CDS
T00335
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
sde
Saccharophagus degradans
Pathway
sde00470
D-Amino acid metabolism
sde00550
Peptidoglycan biosynthesis
sde01100
Metabolic pathways
sde01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Sde_0850
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Sde_0850
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Sde_0850
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sde01011
]
Sde_0850
Enzymes [BR:
sde01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Sde_0850
Peptidoglycan biosynthesis and degradation proteins [BR:
sde01011
]
Precursor biosynthesis
Amino acid ligase
Sde_0850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
CPSase_L_D2
ATP-grasp_3
ATP-grasp
ATPgrasp_ST
GARS_A
ATPgrasp_Ter
TTL
Motif
Other DBs
NCBI-ProteinID:
ABD80112
UniProt:
Q21MG7
LinkDB
All DBs
Position
1104079..1105023
Genome browser
AA seq
314 aa
AA seq
DB search
MTTTYVKKFDGNTAALGRTLVLFGGTSSEREVSLRSGAAVLQALQAGGVDAHGLDVQADA
IAKIEAFAPDRVFIALHGPGGEDGKMQAVLDWLAIPYTGSDHAASALAMDKLKTKQVWQS
VGLVTPEYASLVENSDWQAVLDSLGGQGFVKPAHEGSSIGMSVVSTAQELKAAYEKAAHY
DAKVLVERRIVGREFTVAVLNGVALPAIGLKTDHVFYDYDAKYVSNTTQYLCPCGLTQEK
EAELQSIAQQAFAAVGCKGWGRVDFMQDEAGNFYLLEVNTVPGMTDHSLVPMAARQSGIE
FNELVLEILAQTLV
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgacttatgtaaaaaagtttgatggcaatacggctgcattgggtcgtactttg
gtgctgtttggtggcacgtcatctgaacgagaggtatctctgcgcagcggtgctgcggtg
ctacaagcgctgcaagcgggcggcgtggacgcgcacggtttagatgtgcaagccgatgcg
atagcgaaaattgaagcgtttgctcctgaccgtgtatttattgctttgcatgggcccggt
ggtgaagacggaaaaatgcaagcagtcttagactggttggctattccttacaccggtagc
gatcacgccgcttccgctttggcgatggacaaattaaaaaccaaacaggtttggcaaagt
gtcggtttggtaacgcctgaatacgcgtcgcttgtagaaaatagtgattggcaagcggta
ttagattctctgggagggcaaggttttgtaaagcctgcacacgaggggtcgagcattggc
atgagtgtggtgagcacagcgcaggagctaaaagccgcctacgaaaaagctgctcactac
gacgcaaaggtattagttgagcgtcgaattgttgggcgagagtttaccgttgcggtatta
aacggtgttgcattgccggcaataggattaaaaactgatcacgttttttacgattacgac
gcaaagtatgtgtccaataccactcagtatctttgcccttgtggtcttacacaagagaaa
gaagcggagcttcaatctatcgctcagcaagctttcgctgccgtgggatgtaaaggttgg
gggcgcgttgattttatgcaggatgaagcaggtaatttttatttgttggaagtaaatacc
gtacccggtatgaccgatcacagtttggttccaatggcagctcggcagtcgggtatagaa
tttaatgaattggttttagaaattcttgcgcagacattggtataa
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