Saccharophagus degradans: Sde_2519
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Entry
Sde_2519 CDS
T00335
Name
(GenBank) bacterial peptide chain release factor 3 (bRF-3)
KO
K02837
peptide chain release factor 3
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sde03012
]
Sde_2519
Translation factors [BR:
sde03012
]
Prokaryotic type
Release factors
Sde_2519
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
RF3_C
GTP_EFTU_D2
MMR_HSR1
EFG_III
SRPRB
Motif
Other DBs
NCBI-ProteinID:
ABD81779
UniProt:
Q21HQ0
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Position
complement(3190653..3192236)
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AA seq
527 aa
AA seq
DB search
MSAHSTAVGTAKRRTFAIISHPDAGKTTITEKLLLFGNAIQVGGSVKGKKGPHAKSDWMS
MEQERGISVTSSVMQFPYKERTVNLLDTPGHEDFSEDTYRTLTAVDSVLMVIDGAKGVED
RTIKLMEVCRLRDTPILSFINKMDRDIRDPIDVMDEIETVLNIEAAPINWPIGMGKEFKG
VYNLYTDIIHVFHHGQGSRIPDDTQIKGLNSPEADALLGAYAADIRDEIELVKGATHKFD
LDAYLAGKLTPVFFGTALGNFGVREMLDGFVEWAPPPLDREANTRVVSAVEDKFSGFVFK
IQANMDPKHRDRIAFMRVCSGTYTRGMKMRHVRLGKDVKISDAVTFLAGDRSQVEEAISG
DIIGLHNHGTIQIGDTFTEGEDLKFTGIPHFAPELFRRIRLKDPLKVKQLQKGLQQLSEE
GSTQVFFPLRNNDIIVGAVGVLQFEVVAYRLKDEYKVEAIYEPVSVATARWVDCEDDKKM
AEFKRKCEDNLAIDGGGHLTYLAPTRVNLSLSQERYPDVLFRSTREH
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcacattccacagcagtaggtaccgccaagcgacgcaccttcgccattatttcc
cacccggatgccggtaaaaccaccatcactgaaaagctattattgtttggaaatgctatt
caggtgggtggttctgtaaaaggtaaaaaaggcccccacgctaaatctgactggatgagc
atggagcaggagcgcggtatttcggtaacctcttctgttatgcagttcccctataaagag
cgcacagtaaacttactcgatacccctgggcacgaagatttctcggaggatacctaccgt
accttaaccgcggtcgactcggtgttgatggtgatagacggcgcgaaaggtgtggaagat
cgcactattaaattaatggaagtgtgccgattgcgggatacacccattctatcgttcata
aacaaaatggaccgtgatattcgcgaccctattgatgtgatggacgaaatcgaaaccgta
ttgaatattgaagcggcccccattaattggccgattggcatggggaaagaatttaaaggc
gtatacaacctctacaccgatattattcatgtatttcaccatggccaaggtagccgtatt
ccagacgatacccaaattaaagggctaaatagcccagaagccgatgcattacttggtgcc
tatgctgccgatattcgcgatgaaatagaactcgttaagggcgcaacccacaaattcgat
ttagatgcttacttggccggaaagctcacgcccgtattttttggtactgcactggggaat
ttcggtgtgcgagaaatgttagacggttttgtggagtgggcaccaccgccactagatcgc
gaggcgaacacgcgcgttgtatctgccgttgaagataaattttcgggcttcgtttttaaa
atccaagcgaatatggacccaaaacaccgagatagaattgcatttatgcgggtgtgtagt
ggtacttacacgcgcggcatgaaaatgcgccatgtgcgtttagggaaagatgtaaaaata
agtgatgccgttacatttttagccggtgatcgcagccaagtagaagaggccatatctggc
gatattattggtttacacaaccacggcactattcaaattggcgatacctttaccgaaggc
gaagatttaaaattcacgggtattcctcactttgccccagaattgtttcgtcgtattcgc
ttaaaagacccacttaaagtaaaacagctgcaaaaagggctgcagcagctgtctgaagaa
ggctctacacaggttttctttccattgcgcaataacgacatcattgtaggcgctgtaggt
gtactacaatttgaagtggtagcgtatagattaaaagatgaatacaaagtagaagctatt
tacgagccggtaagtgttgcaactgctcgctgggtagactgtgaagacgacaagaaaatg
gctgagtttaaacgcaagtgtgaagataacttggcgattgatggcggtggtcacttaacc
tatttagcacctactcgagtgaatctttccttgtcacaggagcgttacccggacgtgttg
ttccgctctacgcgtgaacattaa
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