Saccharophagus degradans: Sde_3671
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Entry
Sde_3671 CDS
T00335
Name
(GenBank) histidine kinase
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
sde
Saccharophagus degradans
Pathway
sde03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Sde_3671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sde03400
]
Sde_3671
Enzymes [BR:
sde01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Sde_3671
DNA repair and recombination proteins [BR:
sde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Sde_3671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
MbtH
Motif
Other DBs
NCBI-ProteinID:
ABD82926
UniProt:
Q21EF3
LinkDB
All DBs
Position
complement(4654239..4655024)
Genome browser
AA seq
261 aa
AA seq
DB search
MRVISLSVDGIFQAAQRGLYDWIADQDADIICLQDLRALEPELDNDIFHPEGYFAYFFDS
GVKHYNGVAIYTRYQPKALIYGLGFSSGVDMEGRYLQIDFERYSIGTLLAPSAVNPAESQ
EVKIQFFDDFQALLHKITRKRRNYIFCGNWNMAHTRKDVENWARNEDQSGFLGHEQQWMN
QLFRQLGYADAFRLAVPDAGEYSWWPSGEVGVADGWRVDHQVISEGLIKKVEYAAMYKTK
TFSSHLPVIVDYDIDDLEGMY
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgagagtaattagtctcagcgtcgacggaatttttcaagctgcacagcgagggctgtat
gattggattgccgatcaagatgctgacatcatctgtttgcaagatctacgcgcgcttgaa
cccgagctagacaacgacatttttcacccagagggttatttcgcctatttttttgattct
ggagtgaaacactataatggcgtggcgatttacactcgttaccagccaaaggcgcttata
tatggcctaggattttccagtggcgtggatatggaaggccgctacctacaaattgatttc
gagcgctattctattggcacgttactggcgcctagcgcagtaaacccagctgaatcgcaa
gaagtgaaaattcagttttttgatgattttcaggccttgttgcacaaaattacgcgcaaa
cgccgcaactatattttttgcggtaactggaatatggcacatactcgtaaggatgtggaa
aactgggcgcgcaatgaagatcagtctggctttttagggcacgaacaacagtggatgaac
caattgttccgccaattgggctacgccgatgcattccgtttggctgtacccgatgcaggc
gaatacagttggtggccctccggtgaggtgggtgtagctgatggctggcgtgtcgatcac
caagttatctctgaaggtttaatcaaaaaagttgagtacgccgcaatgtacaagactaaa
accttctctagccatttaccggttattgtcgattacgatatcgacgacctagagggaatg
tattag
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integrated database retrieval system
