Streptomyces deccanensis: L3078_20660
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Entry
L3078_20660 CDS
T08215
Symbol
rfbH
Name
(GenBank) lipopolysaccharide biosynthesis protein RfbH
KO
K13328
dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase [EC:
4.2.1.164
]
Organism
sdec
Streptomyces deccanensis
Pathway
sdec00523
Polyketide sugar unit biosynthesis
sdec01100
Metabolic pathways
sdec01110
Biosynthesis of secondary metabolites
sdec01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sdec00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
L3078_20660 (rfbH)
Enzymes [BR:
sdec01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.164 dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase
L3078_20660 (rfbH)
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Motif
Pfam:
DegT_DnrJ_EryC1
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ULR51520
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Position
complement(4646349..4647653)
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AA seq
434 aa
AA seq
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MTTRKELVLEAVRKYHHEVHDDGPFVPGTTEIWPSGAVLDEEDRVALVEAALEMRIAAGR
SSRRFESAFARKLKRRKAHLTNSGSSANLLATTALTSPLLEDRRLRPGDEVITVAAGFPT
TVNPILQNGLVPVFVDVDLGTYNTTADRVAQAIGPRTRAIVIAHALGNPFPVTEIAQLAD
EHDLFLIEDNCDAVGSRYDDRLTGTFGDLTTVSFYPAHHLTMGEGGCVLTSNLALARIVE
SLRDWGRDCWCEPGESNKCLKRFDYQMGTLPAGYDHKYIFSHVGYNLKATDLQAALGLTQ
LDKLDDFCAARRRNWKRLREGLDGVPHLLLPEATDRSDPSWFGFVITVDPEAPFHRAELV
QFLEDRKIGTRRLFAGNLTRHPAYIDQPHRVVGDLANSDIITDQTFWVGVYPGLTDEMLD
YVVSSVRTFVASRT
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcgcaaggagctcgtgctggaggcggtgcgcaagtaccaccacgaagtccac
gacgatggaccgttcgtcccgggaaccacagagatctggccctccggcgcggtcctggac
gaggaggaccgggtggccctggtggaggcggccctggagatgcggatcgcggcgggccgc
agttcgcggaggttcgagtcggccttcgcccgcaagctcaagcgccgcaaggcgcacctg
accaactccggctcctcggccaacctccttgcgacgacggccctcacctcgcccctcctg
gaggaccgcaggctgcggcccggcgacgaggtgatcacggtcgcggccggtttccccacg
accgtcaacccgatcctgcagaacgggctggtgcctgtcttcgtcgacgtcgacctcggg
acctacaacacgaccgccgaccgggtggcgcaggccatcggtccccggaccagggccatc
gtgatcgcgcacgcgctcggcaacccgttcccggtcacggagatcgcccaactcgccgac
gagcacgacctcttcctcatcgaggacaactgcgacgcggtcggctcgcgctacgacgac
cggctcaccggcaccttcggcgacctgaccaccgtcagcttctacccggcgcaccacctg
acgatgggtgagggcggttgcgtcctcacctcgaacctggcgctggcgcggatcgtggag
tcgctgcgtgactggggccgggactgctggtgcgagccgggcgagagcaacaagtgcctg
aagcggttcgactaccagatgggcaccctgcccgccggatacgaccacaagtacatcttc
tcgcacgtcggttacaacctgaaggcgaccgatctgcaggcggcgctcggcctgacccag
ctcgacaagctcgacgacttctgcgcggcacggcgacgcaactggaagcggctgcgcgag
ggcctggacggcgtaccgcacctgctgctgcccgaggcaaccgaccgcagcgacccgagt
tggttcggcttcgtgatcacagtggaccccgaggcgcccttccaccgggccgaactggtg
cagttcctggaggaccgcaagatcggcacgcggcggctgttcgccggcaacctcacccgg
caccccgcctacatcgaccagccgcaccgcgtcgtcggtgacctcgccaacagcgacatc
atcaccgaccagacgttctgggtgggcgtctacccggggctcaccgacgagatgctcgac
tacgtcgtctcctcggtccggaccttcgtggcgagccgcacctga
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