Streptomyces deccanensis: L3078_28830
Help
Entry
L3078_28830 CDS
T08215
Name
(GenBank) glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sdec
Streptomyces deccanensis
Pathway
sdec00260
Glycine, serine and threonine metabolism
sdec00460
Cyanoamino acid metabolism
sdec00630
Glyoxylate and dicarboxylate metabolism
sdec00670
One carbon pool by folate
sdec00680
Methane metabolism
sdec01100
Metabolic pathways
sdec01110
Biosynthesis of secondary metabolites
sdec01120
Microbial metabolism in diverse environments
sdec01200
Carbon metabolism
sdec01230
Biosynthesis of amino acids
sdec01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sdec00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
L3078_28830
09102 Energy metabolism
00680 Methane metabolism
L3078_28830
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
L3078_28830
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
L3078_28830
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
L3078_28830
Enzymes [BR:
sdec01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
L3078_28830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
ULR52960
LinkDB
All DBs
Position
6457611..6459059
Genome browser
AA seq
482 aa
AA seq
DB search
MSAEPLSHESTAFRAALDVIRAVEPRVADAIGQEVTDQREMLKLIASENYASPATLLTMG
NWFSDKYAEGTVGRRFYAGCRNVDTVESLAAEHAKELFGARHAYVQPHSGIDANLVAFWS
VLADRVEAPFLEKAGARQVNDLSDADWAELRQAFGNQRMLGMSLDAGGHLTHGFRPNISG
KMFDQRSYGTDPATGLIDYEALRTSARDFKPLIIVAGYSAYPRLVNFRIMREIADEVGAT
LMVDMAHFAGLVAGKVLTGDFDPVPHAQIVTTTTHKSLRGPRGGMVLCDDSLKDQVDRGC
PMVLGGPLPHVMAAKAVALAEARQPAFQDYAQRIVDNSRALAEGLMRRGATLVTGGTDNH
LNLIDVATSYGLTGRQAEAALLDSGIVTNRNAIPADPNGAWYTSGIRIGTPALTTRGLGT
GEMDEVAGLIDRVLTTTEPGTTKSGAPSKAQHVLDAKVADEISRRATDLVAGFPLYPEID
LG
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccgagcccctctcccacgagtccaccgccttccgtgccgccctcgatgtgatc
cgcgccgtcgagccgcgcgtggccgacgccatcggccaggaggtcaccgaccagcgcgag
atgctcaagctgatcgcctccgagaactacgcctccccagccaccctcctcaccatgggc
aactggttcagcgacaagtacgccgagggcaccgtcggccgccgcttctacgccggctgt
cgcaacgtcgacaccgtcgagtccctcgccgccgagcacgccaaggaactcttcggcgcc
cgccacgcctacgtccagccgcactccggcatcgacgccaacctggtcgccttctggtcc
gtcctcgccgaccgggtcgaggcccccttcctggagaaggccggcgcccgccaggtcaac
gacctctccgacgccgactgggccgaactccgccaggccttcggcaaccagcgcatgctc
ggcatgtccctggacgccggcggccacctcacccacggcttccgcccgaacatctccggc
aagatgttcgaccagcgctcctacggcaccgaccccgccaccggcctcatcgactacgag
gccctgcgcacctccgcccgtgacttcaagccgctgatcatcgtcgccggttactccgcc
tacccccgtctggtgaacttccggatcatgcgcgagatcgccgacgaggtcggcgccacg
ctcatggtggacatggcgcacttcgcgggcctcgtcgccggcaaggtcctcaccggcgac
ttcgaccccgtaccgcacgcccagatcgtcaccacgaccacccacaagtcgctgcgcggt
ccgcgcggcggcatggtcctgtgcgacgactccctcaaggaccaggtcgaccggggctgc
ccgatggtcctcggcggcccccttccgcacgtcatggccgccaaggccgtcgccctcgcc
gaggcccgtcagcccgccttccaggactacgcccagcgcatcgtcgacaactcccgcgcc
ctcgccgagggattgatgcgtcgtggagccaccctggtcaccggcggtaccgacaaccac
ctcaacctgatcgacgtcgccacctcctacggtctcaccggccgccaggccgaggccgcg
ctgctcgactccggcatcgtcaccaaccgcaacgccatcccggccgacccgaacggcgcc
tggtacacctccggcatccgcatcggcacgcccgcgctgaccacgcgtgggctcggcacc
ggcgagatggacgaggtcgccggcctcatcgaccgtgtcctcaccaccaccgagcccggc
accaccaagtcgggcgccccctccaaggcccagcacgtcctcgacgcgaaggtcgctgac
gagatctcccgtcgcgccaccgacctcgtcgcgggcttcccgctgtacccggagatcgac
ctcggctga
DBGET
integrated database retrieval system
