Sphingobacterium daejeonense: NCTC13534_00417
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Entry
NCTC13534_00417 CDS
T06632
Name
(GenBank) N-formylmethionyl-tRNA deformylase
Organism
sdj
Sphingobacterium daejeonense
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ResIII
Motif
Other DBs
NCBI-ProteinID:
VTP88372
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Position
1:complement(357963..359867)
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AA seq
634 aa
AA seq
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MQQVDTLTSYRLVYSLGKHPYLGYLIEPHIVHLNQNGSYSLSYKRVFSNTVDEFANALDD
VDYELIRLCDEIEQTQVIKRFHKKAVRPADYFSKIFNDKLFDHIRPKIENRLLKILNNIG
DKPLFLMSKDGYPAEQELRIAEKSTSILFHFRRNENETRYFPTLKYDGHRMEFMFKNADV
IVNQQAWLLLENVLYHFDEELEGKKLTPFLNKRYISIPRNTEKKYFETFVTTLIEKHHVY
AEGLDIINYREQAVPQLRIVYSPDQEAQLQLFFQYGEYCFPAGAQHPVTVRYVFDKENQS
HKFFRIKRSLQWEENKADTLEDFGLEKADALFGSYHPKSTLSGLRPSSIEWVNDHISELT
DAGFHIVQTDSDKKFLIGKTSISIEVSEKNDWFDISAIVRFGDYEIPFINLRQHILNKIQ
EFELPNGEIAIIPQEWFSQYEHLFQFSSQKEGIRLSRAHIGLVHDISEHTQVTLQRKLNK
LGEFDEINDVDTPVGFKGSLRPYQKAGYNWFHFLGEYRFGGLLADDMGLGKTVQTLALLQ
HQKEQLTGTDQPKTSLLIVPTSLIFNWQKEAEKFTPKLRVLLHTGTYRSKDNFAFSHFDL
IITTYGVARIDEELLSGFYFNYVILDESQNIKKP
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaggtcgatactctaacttcttaccgtttagtctactcattagggaaacatccc
tatttgggttatcttatcgaacctcatattgtccatttaaatcaaaatggctcctattcc
ctctcctacaaaagagtttttagcaatacagtcgacgaatttgccaatgctctggatgat
gttgattatgaattaatcagactatgtgatgagattgagcagactcaagtcatcaagcgt
tttcataaaaaagcagtaagaccggcagactatttcagcaaaatattcaacgacaagtta
ttcgatcatattcgtcctaaaattgaaaatagacttctcaagatcttaaataacattggt
gacaaaccattgtttttaatgagcaaagatggctatcctgcagagcaagaacttaggatt
gctgaaaaatcaaccagcatattattccatttccgcaggaacgaaaatgaaactcggtat
ttcccaacattgaaatacgatggtcacagaatggaatttatgtttaaaaatgctgatgtc
attgttaatcaacaagcttggctattgctcgaaaacgtactttaccattttgatgaggag
ctggaaggcaaaaagttaactccatttttaaataaaagatatatttcaattccccgaaat
acagaaaagaaatatttcgaaacttttgttaccacattaattgaaaaacaccatgtctat
gctgaaggattagacattatcaattatagggagcaagcagttcctcaacttcgaattgtt
tacagtccagaccaggaggcgcagttgcagttattttttcaatatggagaatactgtttc
cctgctggagctcaacaccctgttactgtcagatatgtctttgacaaggaaaatcagtcc
cacaagttctttagaataaaaagatctttacaatgggaagaaaataaagcagatactttg
gaggattttggcctagaaaaagctgatgccctatttggatcttatcaccccaaatcaaca
ctttctggattgcgtccttctagcattgaatgggtaaatgatcatatatcagaattgacg
gatgccggttttcatattgttcaaaccgatagcgacaagaaattcttgattggaaaaacc
agcattagcattgaggtttcagaaaagaatgactggtttgatatcagcgctattgtaaga
tttggcgattatgaaattcctttcatcaatttacgtcagcatattttaaataaaattcag
gaattcgaattaccaaatggagaaatagcaatcattccacaagaatggttttctcaatat
gagcatttattccagttctcttctcaaaaagaaggcatcagattaagccgtgctcacata
ggtttagtacacgatatttcagagcacactcaagtaaccctgcagcgcaagctcaacaaa
cttggcgaatttgacgaaattaacgatgtcgacactccagtaggtttcaaagggtcctta
agaccctatcaaaaagcaggatacaattggtttcattttctaggagaatatcgttttgga
ggattacttgctgatgatatgggtttaggaaaaacagttcagacgcttgctcttttacaa
catcaaaaggaacaactaacaggaacagaccaacctaagacatctttactgatcgttcca
acctcattgatattcaactggcagaaagaagccgagaaatttacacccaaattgagagtg
ctattacatactggcacctatcgaagtaaagataactttgctttcagtcatttcgacctt
attatcacaacttacggagttgcacgcatagatgaagagttgttatctgggttttatttc
aactatgtcattctagatgaaagccaaaatattaaaaaaccctag
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