Sphingobacterium daejeonense: NCTC13534_04522
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Entry
NCTC13534_04522 CDS
T06632
Symbol
priA
Name
(GenBank) Primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sdj
Sphingobacterium daejeonense
Pathway
sdj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC13534_04522 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdj03400
]
NCTC13534_04522 (priA)
Enzymes [BR:
sdj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC13534_04522 (priA)
DNA repair and recombination proteins [BR:
sdj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC13534_04522 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
PriA_CRR
nSTAND3
PriA-like_WH
zinc-ribbons_6
TsaE
Motif
Other DBs
NCBI-ProteinID:
VTQ04400
LinkDB
All DBs
Position
1:complement(3762160..3764724)
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AA seq
854 aa
AA seq
DB search
MESFLLAHDISHLISHISHPKSKPYLCPMSQLDLTAPNRTTYFVEVILPLAIAKSYTYRV
PFDLSDKIAVGCRVIVQFGKNKIYSAIVKNITTEAPLQYEAKYILDVVDNEPIVNHIQLQ
MWDWIAEYYMCYVGDVMQAALPAALKMASETKIMASDDPSLDRSIVSDKGYMILEALDLA
GELTVNDVIKILGQKTVFPLLRSLFEHGFILISEEIKQKYKPKTKSFLRLASEFNDPDGR
RELLDSLNRAPKQQDAVIAFLQLLKSKNDISRQEVMEASGSGAGAITGLIEKGVFTVEEK
VVSRFEGTDVLLSPDFNFSQAQQNAFQQIEESFQEKDVVLLHGVTASGKTQIYIRLIEEV
LRKGKNALYLLPEIALTAQITERLKLHFGDELGVYHSKFNDNERAEVWHKVNKGEFKVVI
GARSSVFLPFNDLGLIIVDEEHENSYKQYDPAPRYHARDTAIYLAQQHQAKVLLGSATPS
VESYYNAKAGKYGLIELTERFGEAKLPAIEIVDITEASRKEEMFSYFSAKLLQAIDETVK
RKEQVILFQNRRGHTPFLQCGTCGYVAKCINCDVSLTYHKSSNLMHCHYCGFSEELVQTC
PACGLPNMQSKGFGTERVEEELEIQLPELRIGRLDLDSTKGKYGFDRVISAFDNQEFDVL
IGTQMITKGLDFGNVTLIGIINADGMINFPDFRAYERAFSLFSQVSGRAGRRQNEGKVII
QTNTPNHRILEQVTNHDYQEMFMSEITERKNYLYPPFYRLIKLDVKHSNQDLVHDAAKRL
ASLLKQQLAERVLGPEPPLVSRVRNNFIQTITLKIERKNISIVKVKELIKQALLHFELDK
KNKGVRVQIDVDPY
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggaatcttttttattagcgcatgatatctcacatctcatatctcatatctcacatccc
aaatctaaaccttatctttgccctatgtctcaactggatttaactgctccaaatcgcact
acttattttgtagaggtcatcttgcctttggcgattgctaaatcttatacatatagagtt
ccatttgacctgagtgacaagatagcggtaggttgtagggtaatcgttcagtttggtaag
aacaaaatatattctgctatcgtaaagaacattacgaccgaagctcccttacaatacgaa
gctaaatacatattggatgtagtcgataatgaacccattgtcaatcatattcaattacag
atgtgggattggatagctgaatactatatgtgttacgttggagatgtcatgcaagcagcc
ttgcctgcagcattaaagatggcttctgaaaccaaaattatggcatcggatgacccaagt
cttgaccgatccatagtatccgacaaaggatacatgattttagaagcattagacctcgcc
ggtgaattgaccgttaacgatgttatcaaaatattagggcaaaaaacagtattcccacta
ttaagaagtctttttgaacacggttttattttaatatctgaagaaataaaacaaaaatat
aaacctaagactaaatcttttctgcgattggcctcggaatttaacgatccagatggcaga
agagaattattggacagcctcaatcgtgctccaaagcaacaagatgcagtgatagctttc
ctacagctgttgaagtccaagaatgatatcagcagacaggaggttatggaagcttcagga
agtggggcaggggcaattacgggtttgatcgaaaaaggtgtatttaccgttgaagagaaa
gtagtcagtaggttcgaagggactgatgtgttgttatctcctgatttcaatttcagccaa
gcacagcaaaatgcctttcaacagatcgaagagtcctttcaagaaaaagatgttgtcctc
ttacacggagttactgcttccggaaaaactcaaatttatatccgcctaattgaagaggta
ttgagaaagggcaagaatgccctctacctcttgccagaaattgctttgaccgcccagatt
accgagcgacttaaactccattttggtgatgagttaggtgtatatcactcaaaattcaat
gataatgaacgtgccgaagtatggcataaagtaaacaaaggtgaatttaaggtggttata
ggagccaggtcttccgtattcctaccttttaatgatcttggtcttatcatagtagatgag
gagcatgaaaattcttataaacagtatgatcctgctccaagatatcatgcacgggataca
gcgatttaccttgcgcagcagcatcaagccaaagttttgttaggttccgccacaccttct
gttgaaagttattacaatgcaaaagctgggaaatacggcctaattgaattgacggaaaga
tttggtgaagctaaattgccagcaattgaaatcgtagatattactgaagcatccagaaag
gaagaaatgttctcctacttcagcgcaaaattgctgcaagccatcgacgaaaccgttaaa
aggaaagaacaggtaatattgtttcagaaccgtcgtggccatacaccattccttcaatgt
ggaacatgcgggtatgtcgcaaaatgtattaactgcgacgtcagcttgacttatcacaaa
tccagtaatttaatgcattgtcactattgcggattttcagaagaattggtgcagacctgt
cccgcttgtggattgccaaatatgcagagcaagggttttggtactgaaagggtagaagag
gagttagaaattcaattgcctgaactaaggatcggaaggctagacttagattctactaaa
ggaaaatatggtttcgacagagtgatttctgcattcgacaaccaagagtttgatgtgctt
atcggtactcaaatgattacaaaaggtcttgatttcggcaacgtgacgttaataggaatt
atcaatgccgatggcatgatcaattttcctgatttcagagcctacgaaagagcattttca
ttgttctcacaagtatcaggtagagcaggacgcagacagaatgaaggaaaagttatcata
caaacaaataccccaaatcatagaattctcgaacaagtaacaaatcatgattatcaggag
atgtttatgtccgaaattacggaaagaaagaactatttatacccccctttttatcgctta
ataaagctagatgtcaagcatagtaaccaggatttggtccatgatgctgccaaaagactt
gcgtcccttttaaaacagcaattagccgagagggtattaggccctgaacctccattggta
tcaagagtgagaaataatttcatccaaacgattactttgaaaatcgaaagaaagaatatc
tccatcgtaaaggttaaggaattaatcaaacaagcattactacattttgaacttgacaaa
aagaataaaggagtacgagttcagattgatgtagacccgtattaa
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