Sulfurospirillum deleyianum: Sdel_0063
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Entry
Sdel_0063 CDS
T01126
Name
(GenBank) beta-lactamase domain protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sdl
Sulfurospirillum deleyianum
Pathway
sdl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sdel_0063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdl03019
]
Sdel_0063
Messenger RNA biogenesis [BR:
sdl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Sdel_0063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Lactamase_B_6
Ndc1_Nup
DUF4755
Motif
Other DBs
NCBI-ProteinID:
ACZ11101
UniProt:
D1B0V7
LinkDB
All DBs
Position
61237..63231
Genome browser
AA seq
664 aa
AA seq
DB search
MQENEVTQQQHNSSNTTPEEKAQNKPRHKRPSNPEEPKKDIRQGDTLDVTPENAEQAPKK
RNNRRRKNNNKTPTASIEGNEVWQRDMKKAIEANQKMHKERLNKAPLVEQSSKGKIKITP
LGGLGEIGGNICVFETENSAIVLDVGMSFPSEDMHGVDILVPDFSYLRQIRKKIAGIIIS
HAHEDHIGAIPYLFKEMQCPLYATPLPLGMISNKFDEHGLKGHKKYFRPVEKRKVYKIGE
FEVEWIHITHSIIDASALAITTEAGTIMHTGDFKIDHTPIDGYVTDLNRFSDYGEKGVLC
LMSDSTNSYKEGITRSESTVGKTFDSIFSKAKGRVIMSTFSSNIHRVYQAIDYGLKYGRR
VCVIGRSMERNLFTAIDLGYIQLDKSIFIDPHEVNKHNDKDVLIVTTGSQGETMSALYRM
ATDEHRHVKIKPTDQIIISAKAIPGNEGSVSKVLNFLLKSGANVAYQDFSEIHVSGHAAQ
EEQKLILRLTKPKFFLPVHGEYNHITKHKETAMQCGIPERNIYLMSDGDQVEVCGKYLKK
IKTIKTGKIFIDNQINQQIADDVVIDRQKLADSGLVMLVIQLDKSEHKLIAKPKIISYGL
VSDREDKAFSVEMEGVIDQFIVNAKAELLENSRALENELRQVVRKHIYRQMKKYPTIVPT
IFMM
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaacgaagtgacacaacaacagcataacagtagtaacactactcctgaagag
aaggctcagaataagccacgacataaacgcccttcaaatcctgaagagcctaaaaaggat
atccgtcaaggcgatacgttagacgttaccccagagaacgctgaacaagctccaaaaaaa
cgaaataatcgaagacgtaaaaataataataaaacaccaactgcttctattgaggggaat
gaagtctggcaacgggatatgaaaaaagccattgaagccaatcagaaaatgcataaagaa
cgcctcaataaagcgcctcttgttgaacaaagttctaaaggaaaaatcaagattacacct
ttagggggattgggcgaaattggcggaaatatttgtgtttttgaaactgaaaattctgcg
attgtccttgatgtaggtatgagtttcccgagtgaagatatgcatggtgttgatatttta
gtgcctgattttagctatttgcgacaaattaggaaaaaaatagctggaattattatttca
catgcgcatgaagatcatattggagcgattccttatttgtttaaagagatgcaatgtcca
ctttatgcgacgcctctacctctaggaatgatttccaataaatttgatgaacatggattg
aaagggcataaaaagtattttagacctgttgaaaaacgaaaagtgtataagattggtgag
tttgaagtcgaatggatacatattacgcactcaattattgacgcatctgctttagctatt
accacagaggctggaacgattatgcacacgggtgatttcaaaatcgaccatacacctatt
gatgggtatgtgactgatttaaatcgtttttcagattatggtgaaaaaggggttttatgt
ttaatgagcgatagtaccaactcttataaagaggggattactcgttcagagagcacggtt
ggaaagacgtttgactctattttttctaaagccaaaggacgtgtcattatgtctacgttc
tcttcaaacatccacagagtctatcaggcgatagattatggtttgaagtatggaagaagg
gtgtgtgtgattgggcgttctatggagcgtaacctctttaccgcgattgatttaggttac
attcaactcgataaaagtattttcattgatccgcatgaagtcaataaacacaacgataaa
gatgtcttaattgtgaccacaggcagtcagggcgagacgatgagtgctctgtatcgtatg
gcaacggatgagcatcgccatgtaaaaatcaaacccaccgatcagattattatctctgca
aaagcgattcctggtaatgagggaagtgtttctaaagtgttgaacttcttactcaaaagt
ggcgcaaatgtggcatatcaggattttagtgagattcacgtaagtggtcatgccgctcaa
gaagaacaaaagcttattttacgattgactaaaccaaaatttttccttccagtgcatggt
gagtacaatcacattacaaagcataaagaaacggcaatgcagtgtggaattcctgagcga
aatatctatttgatgagcgatggagatcaagtcgaagtgtgtggtaaatatttgaaaaaa
attaaaaccattaaaacaggtaagatttttattgacaatcaaatcaatcaacaaattgcg
gatgatgtggtcattgaccgtcaaaaactcgctgattctggcttagtgatgttagtgatt
cagttagataaaagtgagcacaaactgatcgcaaaaccaaaaattattagttatggattg
gtttctgatagggaagataaagctttttctgttgagatggaaggggtaattgatcagttt
attgtcaatgctaaagctgagttactagagaactcacgtgcgttagaaaatgaacttcgt
caagtggtgcgtaaacatatttaccgccaaatgaaaaagtatccaaccatcgttcctacc
atttttatgatgtag
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