Stegodyphus dumicola: 118196999 Help Entry 118196999         CDS       T07385                                  Name (RefSeq) collagen alpha-1(I) chain-like   KO K19719   collagen type II alpha Organism sdm  Stegodyphus dumicola Pathway sdm04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:sdm00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     118196999  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:sdm00536]     118196999 Glycosaminoglycan binding proteins [BR:sdm00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    118196999 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  118196999 NCBI-ProteinID:  XP_035224360 LinkDB All DBs Position Unknown AA seq 1484 aa AA seqDB search MELPLIFAYVTWTLFCVGAYAQYYEEIDDIDDVTTCLFEGVRYVDQEEWKPDACTSCKCY LGNTVCDTEECPDLVCRTQKYVPLGKCCPVCADDDAVFGPEETVSPRPAPDFPDRQVPAV GLPDYAVVPVVGPPGSEGEPGIPGTPGARGLPGQPGSHGSPGEPGPPGPPGHLGYGNWFN QLALQGFSGDKGPAPDAFHFMQAQVGPVGPRGSPGPPGQPGPQGFQGIRGETGDAGAPGP SGSPGPRGLPGLPGKDGESGEDGRPGPPGPPGSPGPRGPPGLPGLPGAKGHRGFPGIDGA KGEQGTAGEKGMVGTPGKMGIPGPMGPPGPRGERGREGPPGPPGLRGIDGLPGQPGPTGP IGRSGPPGFPGSPGPKGESGAVGPKGSQGLTGPRGEAGTPGIPGERGQTGPPGKDGIPGE RGSPGDRGPSGAPGFPGAVGPPGLVGAQGVPGPKGSQGNRGEPGVRGESGRKGEQGTVGP RGLPGIPGSQGKRGKSGPPGPAGPPGSPGERGPAGLRGLPGAEGAPGMKGIPGDRGLEGP IGPKGPQGDVGRQGPPGLQGLRGPPGSAGSPGKDGSPGERGASGLDGKQGPPGPQGTQGL PGLVGLPGTKGEKGERGTDGLPGIPGPQGRRGDSGKDGLPGLQGERGPAGQPGAKGAPGS PGSRGFQGIPGLPGAAGQPGKSGSPGTPGSPGQVGPQGERGERGFPGERGPAGLPGPPGL RGEQGPSGKDGALGPRGEKGAKGTAGPSGLVGLPGRRGDFGPPGPKGDRGDSGPMGPAGP QGRPGEPGPIGLTGIQGPQGDSGEKGAIGQPGQQGNPGPQGQQGEKGQQGPQGQQGFPGP VGLPGSRGVKGAQGLEGPKGETGDIGPPGPPGQTGQRGLTGPQGDKGPKGDEGKKGHAGF PGTPGLPGTAGTPGKQGNPGPPGSPGVQGLTGSKGDSGRAGPPGPPGIPGINGFPGAKGD SGSEGRPGPQGPAGPAGPTGEKGPPGLPGIQGRTGPQGPRGSQGERGPEGKTGSDGNPGL QGPPGPRGPQGAPGEPGPEGPQGKDGPPGAPGRVGEKGPSGLPGQPGQPGLPGLQGIPGP SGPPGASGERGQRGERGLPGQPGPQGARGSPGPIGPTGDKGPKGDIGSSGDKGHRGLPGL QGLPGPTGPPGDKGMTGDPGPPGMKGPPGPKGPIGNPGNTGPPGMLGIPGPRGPPGEHGR DGPPGPSGPPGPPGPPGPGFQYDAAMLQALMSQGQVKGPDPLLSDQPDLDLSSASPEEKK KLVFQFYEKLVRDYSELRKPTGEKDFPAKNCMQLAGAQPSLPSGKYWIDPNGGNKNDAIE VFCNMDTNETCIIPDPQDVPKGSYVSGRGQKTWFSEMQSGSTFHYKIDHGQLTFLQLLSE RASQNITYHCRNSIAYYDAKHKFFKRAVKLMAYNDLELSADGNKRFVYSSPFDGCQSRSD DWSYSILSYTTDKPQRLPIMDIAPRDVGLNNQEFGISIGQACFV NT seq 4455 nt NT seq  +upstreamnt  +downstreamnt atggaattgcctctgatatttgcatatgtcacatggactttgttttgcgttggagcttat gctcaatattacgaagaaatagatgatattgatgacgtgactacatgccttttcgaaggc gtgcgttatgttgatcaagaagaatggaaacccgacgcctgcacctcttgcaaatgttac ttaggtaatacagtttgcgatacggaagaatgccctgatttggtttgcaggactcagaaa tatgtaccactgggaaaatgctgtcccgtatgcgcagatgacgatgccgtatttggccca gaggaaactgtgagtccgaggcctgcacctgactttcctgatcgtcaagttcccgctgtt ggattgccagattatgctgtcgttcctgttgttggccctcctggctctgaaggagaacct ggaattcctgggacacccggagcaaggggcttacctggacaacctggatcacacggatct cctggagaacccggtccaccaggtcctcctgggcacttaggatacggcaattggttcaac cagctggcactgcaaggattttctggtgataaaggccctgcacctgatgcatttcatttt atgcaagcacaagttggcccagttggacctcgcggttcaccgggacctcctggccagccc ggacctcaaggttttcaaggtatacgcggtgaaactggagatgctggagcacctggacca tctggatctcctggtccgagaggtttacctggtctacctggaaaagatggagagtctgga gaagatggtcgacctggtccccccggcccaccgggatctccgggtccaaggggtcctcct gggcttccaggattgcctggagcaaaaggacatcgaggatttcctggtatagatggagct aaaggagagcaaggcacggctggagaaaaaggtatggtaggcacacctggaaaaatgggc attcccggaccaatgggtccacctggtcccagaggagaaagaggtagagaagggccacct ggacctcctggtctgaggggtattgatggactgccaggacaacctggaccaaccggacca attggaagatcagggcctcctggatttcctggatctcctggaccaaagggtgaatctgga gctgttggacctaaaggtagtcagggtcttacaggaccgagaggagaagcaggtacacct ggaatacctggagaacgtggtcagactggacctccaggaaaagatggaatacctggtgaa aggggaagccctggtgatagaggacctagtggtgctcctggatttcctggggctgttgga cctccaggtcttgttggcgctcaaggcgttcctgggccaaaaggctctcaaggtaatcga ggagaacctggtgttagaggagaaagtggtcgcaaaggagaacaaggaactgttggacct agaggtttgcctggaattcctggaagtcaaggaaaaaggggaaagagcggccctcctggt cccgctggtcctccaggatcacctggtgaacgaggacccgctggcttaagaggattacct ggagctgaaggtgcacctggtatgaaaggtattcctggtgatcgtggattggaaggaccc attggtccaaaaggtcctcagggtgatgttggacgccaaggtcctcctggccttcaaggt ttgaggggccctcctggatcagctggttctccaggaaaggatggatctccaggcgaaagg ggtgcttctgggctagatggcaaacaaggtcctccaggccctcagggtacacaaggacta cctggtttagttggtttgcctggtacaaaaggagaaaagggtgaacgagggactgatggt ttgcctggtatacctgggcctcaaggacgaagaggagattccggaaaagatggattacct ggtttacaaggagagcgaggtccggctggtcaaccaggagctaaaggagctccgggatca ccgggttccaggggctttcaaggaatacctggtttaccaggagctgctggtcagccagga aaatcgggatcacctggaacacctggatccccaggacaagttggtcctcaaggtgaacgc ggtgaaagaggtttccctggagaaagaggacctgctggtcttcccggacctcctggatta cgcggagaacaagggccatctggaaaagatggcgctcttgggcctcggggagaaaaaggt gctaaaggaactgctggtccatctggcttagttggacttcctggtagaagaggggatttt ggacctcctgggccgaaaggtgacagaggtgattcgggaccaatgggaccagctggtcct cagggtcgtcctggagaacctggtccaattgggttaactggcatacagggccctcaaggc gattctggagaaaagggtgcaattggacagccaggacaacaaggtaacccagggcctcaa ggacagcaaggggagaaaggacaacaaggacctcaaggtcaacaaggatttcctggacct gttggtctccctggatctcgtggagtcaaaggcgctcaaggtttagaaggaccgaagggt gaaactggtgatattggtcctcctggtcctccagggcaaactggtcaacgaggcttaaca ggaccacaaggtgataaagggccaaaaggagatgaagggaaaaagggtcatgctggtttt cctggtacccctggacttcctggaactgcaggaacaccaggtaaacaaggtaatcctggc cctccaggatctcccggagttcaaggattgacaggatcaaaaggagattctggtagagct ggacctccgggcccacctggtattcctggtattaacggttttcctggggctaaaggtgat tcaggatctgaaggcagacctggccctcaaggtcctgctggtcctgctgggcccactggt gagaaaggtcctcctggtttgcctggaattcaaggaagaacaggtcctcaaggccctaga ggatctcagggtgagaggggtcctgagggaaagactggctctgacggtaatcctggacta cagggaccaccaggaccacgaggaccacaaggcgcacctggagagccgggacctgaaggc cctcaaggtaaagatggaccacccggtgctcctggaagagttggtgagaaaggaccatca ggtcttcctggtcagcctgggcaaccgggtttacctggtcttcagggtattccaggtcct tcaggacctccaggtgcttctggggaacgtggacaaagaggtgaaagaggtctgcctggg caaccaggacctcaaggagcccgtggctcaccaggaccaattgggccaacaggagataaa gggcctaagggtgacataggatcttctggtgacaaagggcatagaggactgccaggatta caaggccttccaggtcccacgggtccacctggagataaaggtatgactggagatcccggc ccaccaggaatgaaggggccacctggaccaaaaggtccaataggtaatccaggaaataca ggtccacctggaatgttgggtataccaggaccaagaggtcctcctggggaacatggaaga gatggccctccaggtccatctggtccacctgggccgccaggtccccctggtccaggcttt cagtatgatgcagccatgttacaagctcttatgtctcagggacaagtgaagggacctgat cccttactaagtgaccagccagacttggatttgtcttctgcttcacccgaagaaaagaaa aaattagttttccaattttatgagaagctcgtaagagattattctgaacttaggaagcca actggagaaaaagatttccctgcgaaaaactgcatgcagttggcaggagctcaaccatct cttcctagcgggaaatattggattgatcctaatggaggcaataagaatgatgccattgaa gtattttgtaacatggataccaatgaaacgtgcattattcctgatccacaagatgtacca aaaggaagctacgtaagtggtcgtggacaaaaaacatggtttagtgaaatgcagtctgga tccacgtttcattacaagattgatcatggtcaacttacattcctgcaattgttgagtgaa agagcatcacaaaatattacttatcattgccgaaattcaattgcttattatgatgcaaag cataaatttttcaaaagagctgtgaaacttatggcttataatgatcttgaactttctgct gatggaaacaagcgctttgtgtatagttcgccatttgatggatgtcagtctcgaagtgat gattggtcatattccatattaagttatacaactgacaagcctcagaggttgcctatcatg gacattgcacctcgagatgttggtttgaataatcaagaatttggtattagcatcggacaa gcatgttttgtgtga

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