KEGG   Shewanella denitrificans: Sden_1234
Entry
Sden_1234         CDS       T00344                                 
Name
(GenBank) type III restriction enzyme, res subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
sdn  Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:sdn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sdn02048]
    Sden_1234
Enzymes [BR:sdn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Sden_1234
Prokaryotic defense system [BR:sdn02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Sden_1234
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD HSDR_N HSDR_N_2 Helicase_C AAA_11 AAA_30 AAA_19 AAA_34 PhoH PTPA SNF2-rel_dom
Other DBs
NCBI-ProteinID: ABE54520
UniProt: Q12PV6
LinkDB
Position
1436850..1439339
AA seq 829 aa
MSVNKAKLTETDIITKFIMPAIKNAGWDDMTQIRQEVKLRDGKVIVRGQLGVRKTVKSAD
IVLYHKPSMPLAVIEAKANKHEVGKGMQQGLDYARLLDVPFIFASNGDGFIFHDKTHGVT
NSLGIAETHHLETEIRLEDFPTPQQLWTKYCIWKGYTQAQLPIINQEYHDDGTGKHPRYY
QLQAINKTVEAISSGKDRVLLVMATGTGKTYTAFQIIWRLWKSRAKKRILFLADRNILVD
QTRINDFQPFGTSMTKVTGRTVDPAFEIHLALYQALTGPEESQKAFKQVDPDFFDLIIID
ECHRGSAADDSAWREILEYFSSAAQVGLTATPKETDEVSNSDYFGDPAYSYSLKEGIEDG
FLAPYKVVRVDIDVDLQGWRPTKGQIDNNGEVIEDRIYNQKDFDRTMVIDERTQLVAETI
TNYLKRTDPMAKTIVFCNDIDHADRMRRAIANLNPEQMAKNEKYVMKITGDDEIGKGQLD
NFINPKKAYPVIATTSELMTTGVDAKTCKLVVLDQNIQSMTKFKQIIGRGTRIDDRYGKL
WFTILDFKKATELFADERFDGTPEKVIKVTPADIEDQGIDIDAANDDLDNGAAENQGDHQ
NDEPDTNQNDTINDPKGDASLDEKWDEGEWTDDEPRKINKYRVSGVTVSKVAERVQYYDS
DGKLVTESFKDYTRKTMAKQFSSLDEFVKRWNESDRKQAVIDELALEGIIWSALEEEVGK
DMDPFDMICHVVYDQPPLTRAERVNNVQKRNYFTKYSATAQAVLQNLLVKYADVGVQEIE
NMQVLKVAPFTEYGNLSEIVKKGFGGKQEYEQAISELEAQIYQIHQQTA
NT seq 2490 nt   +upstreamnt  +downstreamnt
atgagcgttaataaagcaaagctaaccgaaaccgatatcatcacaaaattcatcatgccg
gcgattaaaaatgcgggctgggatgatatgacgcaaattcgccaagaggtgaaactgcgt
gacggtaaagtgattgttcgcggccaattaggcgtgcgtaaaacggttaagtctgctgat
atcgtgctttatcataaacccagtatgccgctggctgttattgaggctaaagccaataaa
catgaagtgggcaaaggcatgcagcaggggctagattatgcccgtttgctcgatgtacct
ttcatctttgcctctaatggcgatggttttatctttcacgataaaacccacggcgtcaca
aacagtctcggcatcgctgagacacatcatctcgaaacagaaatccgcttagaagacttt
ccaacgccgcaacagctttggactaaatactgtatctggaaaggctacacccaagcgcag
ctgccaataattaaccaagaatatcatgatgatggcaccggcaagcacccgcggtattac
cagctgcaagctatcaataaaaccgtagaagccatttcatcgggtaaagaccgtgtatta
ctcgtgatggcgaccggcacaggtaaaacctacaccgcatttcaaatcatctggcgatta
tggaagtcccgcgccaagaagcgcatcttgtttttagccgaccgcaatattttggttgat
caaacccgcattaatgactttcagccctttggcacttccatgactaaagtcactggacgc
acggtcgatcctgcatttgaaatccatctagccttataccaagcattaaccggcccagaa
gaaagccaaaaagcctttaagcaagtcgacccagacttctttgacttaatcataatcgac
gagtgccaccgcggtagtgcagcagatgacagtgcatggcgtgaaattttagaatatttc
agtagcgccgcccaagttggccttactgccacccctaaagaaactgatgaagtatcaaac
tcagactactttggcgaccctgcctacagttattccctcaaggaaggcattgaagacggt
tttttagcgccatacaaagtggtgcgggtagatatcgatgtcgatttacaaggttggcgc
cccacaaaaggccaaatcgataataacggtgaagtgatagaagacagaatttataatcaa
aaagacttcgaccgcaccatggtgattgatgagcgcacccagctggtagccgaaaccatc
accaactacctaaaacgcaccgatcctatggccaaaactatcgtgttttgcaacgacatt
gaccacgccgatcgcatgcgccgcgctattgccaaccttaaccctgagcaaatggccaag
aatgaaaaatacgtgatgaaaatcaccggcgatgatgaaataggcaaagggcagctggac
aactttattaatcctaaaaaagcctaccctgttattgccactacctctgagcttatgacc
acaggcgtcgatgctaaaacctgtaagttagtggtgctggatcaaaacattcagtccatg
accaagtttaaacagatcattggccgtggcacccgcattgacgacagatacggtaagctg
tggtttactattttagacttcaaaaaagccactgaactgtttgccgacgaacgctttgat
ggtaccccagaaaaagtgattaaagtgacacccgcagatatcgaagatcaaggcattgat
attgatgcggctaatgatgacctcgataacggtgcggcagaaaatcaaggtgatcaccaa
aatgatgaaccggatactaatcaaaatgacaccataaacgaccctaaaggtgatgctagc
cttgatgaaaaatgggacgaaggtgaatggactgacgatgaaccccgtaaaataaacaaa
taccgcgtgtcaggggtcaccgtcagtaaagtggccgagcgggtacagtattacgacagc
gacggtaaattagttaccgaatcttttaaagattacacccgtaaaaccatggctaaacag
ttcagctcgttagatgaattcgtcaagcgttggaatgagtcagaccgcaaacaagccgtg
attgatgaattggcgctggaaggcattatttggtcggcgttagaggaagaagtgggtaaa
gacatggaccccttcgatatgatttgccacgtagtgtacgatcaaccaccactcacccgc
gccgaacgagtaaataacgtgcaaaagcgcaattacttcactaaatattcagccacagca
caagcggtactgcagaatttactggtaaaatatgctgatgttggcgtgcaagaaattgaa
aacatgcaagtgctcaaagttgccccatttaccgagtacggtaatttgagtgaaatcgtt
aaaaaaggctttggcggcaaacaagaatacgagcaagccatcagtgaattagaagcgcag
atttatcaaattcaccagcaaacggcctag

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