Shewanella denitrificans: Sden_1800
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Entry
Sden_1800 CDS
T00344
Name
(GenBank) alpha amylase, catalytic region
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00500
Starch and sucrose metabolism
sdn01100
Metabolic pathways
sdn01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Sden_1800
Enzymes [BR:
sdn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
Sden_1800
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Gene cluster
GFIT
Motif
Pfam:
CBM_20
Alpha-amylase
Alpha-amy_C_pro
Glyco_hydro_70
Tail_tube
Motif
Other DBs
NCBI-ProteinID:
ABE55084
UniProt:
Q12N92
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Position
2127391..2129274
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AA seq
627 aa
AA seq
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MAASNTKIIIKKRTSFRLTFALVAGLSALGLSSSASSAENGVMMQYFHWYTPADGKLWTQ
VQQESSALAAAGFTALWLPPAYKGASGALDVGYGVYDMYDLGEFNQKGAVRTKYGTKSQY
VSAINTAHTQGLQVYGDLVFNHRGGADATESVTAVRVARDNRDREFGADVQIDAWTRFDF
TARQNQHSAFKWRWYHFDGVDWAQNLTESNIFKFRGTGKGWDWEVDTENVNYDYLMYADL
DFNHPEVVQELKDWGDWYLSQTQVDGFRLDAIKHIRYEFFNDWLDYMRANSGKTLFTVGE
FWSYDTAKLHNYINKTSGRMSLFDAPLHLNFHQASTANGNYDMRRIWDNSLMKEQPNLAV
TLVENHDTQACQALASPVNDWFKPLAYAFILLRSQGYPNVFYADYYGANYTSSDNSCNNS
VITMVSHKTKIDQLLKARKDYAYGPQIDYLDHWDIIGWTRLGDTSHPKAMAVIMSDGASG
TKWMNVNRTSTRFMDITGHRSETVTTNADGWGQFPVNGGSYSVWVEQATSTSTVAVTFNC
NNGVTYAGQDVYVVGNQANLGNWNTAAAIKLSPTGYPSWSGTINLPMSKAIEWKCIKKSA
TEVVWQGGGNNTYTTPSSGVGSTSASF
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttcaaatacaaaaataataatcaagaaacgcacaagctttaggctaaccttc
gccctcgtggcgggtttgtctgccttagggcttagcagcagtgcgagcagcgccgaaaac
ggcgtcatgatgcagtattttcactggtacaccccagccgatggcaagctttggactcaa
gttcaacaagaatccagcgcactagccgcggcgggattcaccgcattatggctgccgcca
gcctacaagggcgcatccggcgccttagatgtgggctacggtgtatacgatatgtacgac
ttaggcgaatttaatcaaaaaggcgctgtacggacaaaatacggcactaaatctcagtac
gtcagtgccattaatacagcccacacacaggggctgcaagtgtatggcgatctggtgttt
aatcacagaggcggcgcggatgccaccgaatctgtcacggcggtgagggtggcgcgggat
aaccgtgatagggaatttggcgccgatgtgcaaatcgatgcctggacacgattcgatttt
accgctaggcaaaatcagcattctgcatttaagtggcgttggtatcattttgatggggtt
gattgggcacagaacctgactgagagtaacatttttaagtttcgcggtacgggcaagggc
tgggactgggaagtcgatacagagaatgttaattatgactatctgatgtacgccgatctc
gactttaatcacccagaagtggtgcaagaattaaaagattggggcgattggtatctatcg
caaactcaagtggatggctttaggctggatgccataaagcatattcgctatgaatttttt
aatgattggctcgattatatgcgcgccaatagtggtaaaaccctgtttactgtgggcgaa
ttttggagctatgacacagcaaaactgcataattacataaacaagacctcggggcgtatg
tccttgtttgatgcgccattgcatttaaactttcatcaagcctcaaccgccaatggcaat
tacgatatgcgccgtatttgggataacagcttgatgaaagagcagcccaatttagcggta
accttagtggaaaaccatgatactcaagcctgtcaggcgctggcttctccagtcaatgat
tggttcaaacctttggcctatgcctttattctgcttcgaagccaaggctaccccaatgtg
ttttatgccgactactatggcgccaattacaccagctcagacaatagttgcaataatagt
gtgataactatggtgtcccataaaacgaaaatcgatcaactgctaaaagcccgtaaagat
tatgcctatgggccgcaaattgattatctggatcattgggacatcataggttggacgcgt
cttggcgatactagccaccccaaggccatggcggtgataatgagtgatggcgcaagcggc
actaaatggatgaatgtaaatcgaacgtcaacccgttttatggatattacaggccatcgc
agtgaaaccgtgacgactaatgccgatggatgggggcaatttccggttaatggcggctct
tattccgtgtgggtagagcaagcaacatcaacaagcacagtagctgtgacctttaattgc
aataatggggtgacctatgcaggccaagatgtgtatgtagtgggtaatcaagccaattta
ggcaattggaatacggcagcagcaataaaattatcacccacaggctatcccagctggagc
gggacaatcaatctacccatgagtaaggctatagagtggaaatgcattaaaaaatccgca
acagaggtggtttggcaaggtggcggcaataatacctataccacgccaagtagcggtgtg
ggtagcacgagtgcgagtttttga
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