Shewanella denitrificans: Sden_2183
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Entry
Sden_2183 CDS
T00344
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00020
Citrate cycle (TCA cycle)
sdn00785
Lipoic acid metabolism
sdn01100
Metabolic pathways
sdn01110
Biosynthesis of secondary metabolites
sdn01120
Microbial metabolism in diverse environments
sdn01200
Carbon metabolism
sdn01210
2-Oxocarboxylic acid metabolism
Module
sdn_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sdn_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Sden_2183
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Sden_2183
Enzymes [BR:
sdn01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
Sden_2183
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
ABE55465
UniProt:
Q12M61
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All DBs
Position
complement(2588172..2590994)
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AA seq
940 aa
AA seq
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MHQGIMKAWLESSHLSGANSTYVEEMYEAYQVDPDSVAADWRVVFDNLPPVNGASAEVPE
AAHSKVRDYFRSVALAGRLKGAGSVSDPELDSKQVKVLQLINAHRFRGHQNANLDPLGLW
KREAVSELDPKFHDFNDEDMQREFNTGSFALGGQTMKLSDIVKALKSTYCGSIGAEYMHI
TDTDEKRWIQQRLEPTLGKANYDKDTKRRILEGLNAAEGMEKYLGAKFPGAKRFSLEGGD
ALVPMMREIIYRAGSAGTKEIVVGMAHRGRLNLLVNVLGKRPAELFDEFAGKHTDRDGSG
DVKYHQGFSSEFVTPGGNVHLALAFNPSHLEIVNPVVIGSVRARQDRLNCKNGLRVMPIT
IHGDSAITGQGIVQETFNMSQTRGFKVGGSIRIVVNNQVGFTTSNAADVRSTEYCTDIAK
MVQAPIFHVNADDPEAVAFIAQLAVDYRNEFKRDVVIDLVCYRRHGHNEADEPSATQPLM
YAKIKKHPTPRKIYADKLIAENSIAEEDVTGLINHYRDALDHGDCVVKEWRPMSERPVDW
SPYIGKDWDAPYDPTMPIARLQNLANKLVSVPESHKLQSRVAKICGDREAMAKGDKPLDW
GFAETLAYASILEDKRRVRITGQDSGRGTFFHRHAVLHNQNDGSTYMPLRNIADEQGPID
ITDSVLSEASVLAFEYGYATAEPGGLTIWEAQFGDFVNCAQVVIDQFLSSGEQKWGRLCG
LTMLLPHGYEGQGPEHSSARLERFLQLCANHNMQVCVPSTPAQVYHMLRRQVVRPMRRPL
VVMSPKSLLRHPLAVSSLEELAEGSFQNIIGEIDSLDSSKVDRVVFCSGKVYFELLEKRR
KENLTNIAILRVEQLYPFPHEEMVAALNEYQHVTDFVWCQEEPQNQGAWYSSQHHFWSAI
PGTAKLTYAGREASAAPACGYPSLHAEQQESLVNSALKLS
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaaggcatcatgaaagcctggctcgaatcatcacatctaagtggtgctaactcg
acctacgtagaagagatgtacgaagcctatcaagtagaccctgattcagttgctgctgat
tggcgcgtcgtttttgataatctccctccggtaaatggtgcctctgcagaagtgccagaa
gctgcccattcaaaagtacgtgactattttcgaagtgtcgctttagcgggtcgattaaaa
ggcgcgggaagcgtcagcgatccagaattagattcgaagcaagttaaagtactgcaattg
atcaatgcccaccgtttccgtggtcatcaaaacgctaacttagacccattgggtttgtgg
aagcgtgaagccgtgtctgaattagatcctaagttccatgattttaatgatgaagacatg
caaagagaattcaatacaggttcgttcgccttaggcggtcaaaccatgaaattgtctgac
atcgttaaggcgcttaaaagcacttactgtggttcgattggtgctgaatacatgcacatt
accgacacagatgagaaacgttggatccagcaacgtcttgagccaaccttaggtaaggct
aactacgataaagacactaagagacgcattctcgaagggttgaacgcggcagaaggtatg
gaaaaatacctaggcgctaagttccccggtgctaagcgtttctcccttgaaggcggcgat
gcactcgtgcctatgatgcgtgaaattatttatcgcgcaggctctgctggcactaaagaa
atcgttgtgggcatggctcaccgtggtcgcttaaacctattagttaacgtactgggtaag
cgtccggctgaacttttcgatgagttcgccggtaaacacacagacagagacggttcaggt
gacgttaagtatcaccaaggtttctcgtctgaatttgtgactccaggtggcaacgttcac
ttagcgcttgctttcaacccgtcgcatttagaaattgttaaccctgtggttatcggcagt
gtgcgtgctcgtcaagacaggcttaattgcaaaaatggcctgcgggtaatgcctatcact
attcatggtgacagcgctattacaggtcagggcatagtgcaagagacattcaacatgtct
caaacccgcggctttaaagtgggcggtagcatacgcatagtggtgaacaaccaagtgggc
ttcactacttcaaatgcagccgatgtgcgctcaacggaatactgtaccgatatcgctaag
atggtgcaggcgccaattttccacgtcaatgctgacgatcctgaagcggttgcctttatc
gcccagttggcggttgattatcgcaatgagtttaagcgtgatgtggtgattgatttagtc
tgttaccgccgtcatggtcacaacgaagccgatgagcctagtgcgactcagcctttgatg
tacgcaaaaattaagaagcacccaacgccgcgtaagatttacgccgacaagttgattgct
gaaaatagcattgccgaagaagatgtcacaggtttaatcaaccattaccgtgatgcgctg
gatcacggcgactgcgtggtgaaagagtggcgtccgatgtctgagcgtccggtggattgg
agcccctacataggtaaagattgggatgcaccctatgacccgactatgcctattgcgcgg
ttacagaacttagccaacaagttagtctcagtgcctgaaagtcacaaacttcagtctcgt
gtggcgaaaatttgtggtgatagagaagccatggcgaagggcgacaagccactggattgg
ggttttgccgagaccttagcctatgccagtatcctagaagacaagcgccgggtgcgcatc
acaggtcaagattctggccgtggtaccttcttccatcgccatgcggtattgcataatcaa
aatgatggcagtacctatatgccactgcgcaatattgccgatgaacaaggcccgattgat
atcacagactctgtgttatcagaagcctcagtgctggcgttcgaatacggttatgccacc
gcagagccgggtggtttaacgatttgggaagcgcaatttggtgatttcgtcaactgcgcc
caagtggttattgaccagttcttatcctcgggtgagcaaaagtggggccgtttatgtggc
ctgactatgttattaccccatggttatgaaggccaaggtccagagcactcgagcgcccgt
ttagagcgtttcctccagctttgtgctaaccacaatatgcaagtgtgcgtgccttcaacc
ccagcacaggtttaccatatgctgcgtcgtcaagtggtgcgtcctatgcgtcgtccactg
gtggttatgtcgcctaagtcgctactgcgtcatccgttagccgtgtctagcctggaagaa
ttagccgaaggtagtttccaaaatatcattggtgaaattgatagcttagacagcagcaag
gttgaccgcgtggtgttctgtagcggtaaagtgtatttcgaattgctggaaaaacgccgt
aaagaaaacctgaccaatattgccatattacgtgttgagcagttatatccattccctcac
gaggaaatggttgctgccctgaacgaatatcagcatgtgaccgattttgtctggtgtcag
gaagagccgcaaaaccaaggcgcttggtacagcagtcagcatcacttctggagtgctatt
ccagggacggctaagttgacttatgccggtcgtgaagcgtctgcggcgccagcttgtggt
tacccaagcctgcatgcagagcaacaagaatcattagtgaatagtgcgttaaaactgtcg
taa
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