Shewanella denitrificans: Sden_2313
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Entry
Sden_2313 CDS
T00344
Name
(GenBank) cystathionine beta-lyase
KO
K01760
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00270
Cysteine and methionine metabolism
sdn00450
Selenocompound metabolism
sdn01100
Metabolic pathways
sdn01110
Biosynthesis of secondary metabolites
sdn01230
Biosynthesis of amino acids
Module
sdn_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Sden_2313
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Sden_2313
Enzymes [BR:
sdn01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
Sden_2313
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Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_5
Aminotran_1_2
DUF4350
Motif
Other DBs
NCBI-ProteinID:
ABE55593
UniProt:
Q12LT3
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Position
2738911..2740098
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AA seq
395 aa
AA seq
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MKEFPPKLATQIVSAGRDKKFTQGVINPPVVRASTVVFDTLDEMQFAIKNKTNGTLFYGR
RGTSTHFAFQQAISELEGGVGTALYPSGAAAISAALLSFLKSGDHLLMVDSAYEPTRALC
DNLLAGFGISTSYYDPMIGAGISELIQPNTKVIFLESPGSITMEVQDVPNICQIAQQHGI
ITLLDNTWASPINCRPFDMGVDVSIQAATKYIVGHSDVMLGTATANEKHWPKLREQSYLM
GQTTSPDDVYLAARGLRTLGVRMAQHEKNALEVALWIQARAEVDHIRHPMFDTCPGHEFF
KRDFSGANGLFSFVLKQGTPQALKAFVEGMQHFKMGFSWGGFESLILSVPGIDKIRTATA
WDKSKPLLRLHVGLEDPQDLIADLDRAFARYHQAE
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattcccccccaaactagccactcagattgtgagtgcaggccgcgataaaaaa
tttactcagggggtgattaatccccctgtggtcagggcatccactgtggtgtttgacacc
ttagatgaaatgcagtttgccatcaaaaataaaaccaatggcacactcttctatggcaga
cgcggcacgagtactcattttgcgttccagcaagccatcagcgagcttgaaggtggtgtt
ggtactgcgctatacccttcgggtgcggcggccattagcgcagcattactgtcctttctt
aagagtggcgaccacttacttatggttgatagtgcctatgaacccacccgtgccttgtgt
gataacctgttggctgggttcggtatttcaaccagctactatgatcccatgataggcgcc
ggcattagcgagcttattcaacccaataccaaggtgatatttttagaatccccaggttct
atcactatggaagttcaagatgttcccaacatatgccaaatagcacaacaacatggcatc
atcaccctacttgataacacttgggcctcgcccatcaattgtcgcccgtttgatatgggt
gtggatgtttctatccaagcggcaaccaaatatatcgtgggacattccgatgtgatgctg
ggcacggccactgccaatgagaaacactggccaaaattaagagagcaaagttaccttatg
ggccaaaccacctcccctgacgatgtttatttggcggcaagaggactgcggaccttaggg
gtgcgcatggcgcaacatgagaagaatgccctcgaagtcgcgctttggatacaggcgaga
gccgaagtcgatcatatccgccaccccatgtttgatacttgcccaggacatgagtttttt
aaacgtgattttagcggcgcgaacggcttattctcgttcgtattaaagcaaggtacccct
caagccctaaaagcctttgtagaaggtatgcagcactttaaaatgggcttttcttggggg
ggatttgaaagccttattctatctgtgcctgggatagataaaattcggactgccactgct
tgggataagagcaaacctttactcagattacatgtgggtcttgaagacccacaggatttg
attgccgatcttgaccgcgcgtttgcaagataccatcaagcagaatag
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