KEGG   Shewanella denitrificans: Sden_2434Help
Entry
Sden_2434         CDS       T00344                                 

Definition
(GenBank) Pyridoxal-dependent decarboxylase
  KO
K01580  
glutamate decarboxylase [EC:4.1.1.15]
Organism
sdn  Shewanella denitrificans
Pathway
Alanine, aspartate and glutamate metabolism
beta-Alanine metabolism
Taurine and hypotaurine metabolism
Butanoate metabolism
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Quorum sensing
Module
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:sdn00001]
 Metabolism
  Carbohydrate metabolism
   00650 Butanoate metabolism
    Sden_2434
  Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    Sden_2434
  Metabolism of other amino acids
   00410 beta-Alanine metabolism
    Sden_2434
   00430 Taurine and hypotaurine metabolism
    Sden_2434
 Cellular Processes
  Cellular community - prokaryotes
   02024 Quorum sensing
    Sden_2434
Enzymes [BR:sdn01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.15  glutamate decarboxylase
     Sden_2434
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
LinkDB All DBs
Position
2898669..2900333
Genome map
AA seq 554 aa AA seqDB search
MMAQLMTSITPRKAQASEDSMLRIFTVPEDAESTLSIIEQKLSEDLAGFLGNSIAALEKP
LSEIETDFQAFQIPTAPRFVSDYTDEIMQNLVAHSVHTAAPSFIGHMTSALPYFVLPLSK
MMVGLNQNLVKIETSKAFTPLERQVLGMMHHLVFSQDGDFYQQWMHSANHSLGAFCSGGT
VANITALWIARNRLLKADGNFNGVNREGMLKALRHYGFDDIAILVSERGHYSLGKAVDLL
GIGRDNIISIATTADNKVDVEAMRLAAKALASKNIKVMAVVGVAGTTETGNIDPLTELAA
LAQELDCHFHVDAAWGGASLLSKKYRHLLKGIELADSVTIDAHKQMYVPMGAGMVLFKDP
ELANAIVHHAEYILRVGSKDLGSQTLEGSRPGMAMIVHACLQIIGLEGYEILINNSLEKA
RYFSELIKKSPDFELITEPELCILTYRYVPSTVQLAMSDACQRQDWHALAQFNECLDGLT
QFIQKHQREQGKSFVSRTRIQPARYNRQHTTVFRVVLANPLTGLEILQGVLAEQQEIAAL
DNEFLPQLLALASA
NT seq 1665 nt NT seq  +upstreamnt  +downstreamnt
atgatggcacagttaatgacctcgataactccccgtaaggcccaagcgtcagaagacagc
atgttacgtatttttaccgtccctgaagacgccgagtctacgttaagcatcatagaacaa
aagttatctgaagatcttgctggcttccttggtaacagcatagcggcgttagaaaaacca
ttaagtgaaatagaaaccgattttcaagcgtttcaaatccctacagcacctcgctttgtc
tctgactataccgatgaaattatgcagaacttggtggctcactcggtccatactgcggcg
ccaagttttattggccatatgacatcagcgctgccctattttgtgctgcccttgtcaaaa
atgatggtcggtctcaatcagaatttggtaaaaattgaaacttccaaagcctttaccccc
ttagaacgccaagtgttaggtatgatgcaccaccttgttttcagtcaagatggcgatttt
tatcaacagtggatgcacagtgccaatcattctctcggcgccttttgctccggcggcaca
gtcgccaacatcacggcgctgtggatagcgcgaaaccgcttgcttaaagccgatggtaat
tttaacggtgtcaatcgtgaaggcatgctaaaagccctgcgtcattatggctttgatgat
attgccattttggtctcagagcgaggtcattattcccttggcaaggccgtagatctacta
ggcattggccgcgataacattatcagcatagccacaaccgcagacaacaaagtggatgtt
gaggccatgcgcctcgctgcaaaagcgcttgccagcaagaatatcaaagtcatggccgta
gtgggtgtggcgggtaccacagaaaccggcaatatcgacccactcaccgagcttgccgcc
ttagctcaggagcttgattgtcactttcatgtggatgcggcttggggcggcgcgagttta
ttgtctaaaaagtatcgacacttgcttaagggcatagagcttgcagattctgtcaccata
gatgcccacaaacaaatgtatgtgcccatgggggccggtatggtgttgtttaaagaccct
gaacttgccaatgccatagtccaccatgctgagtacattttacgggtgggttcaaaagat
ttaggcagtcaaaccttagaaggctcccgccctggcatggccatgatagtgcatgcttgc
ttgcagataatcggtcttgaagggtatgaaatcctcatcaataacagcctagaaaaagcc
cgttatttcagtgagctcattaaaaaatcccctgactttgaactaatcactgagcctgag
ctgtgcattctcacctaccgctacgtgcccagtacagtgcaattagccatgagtgatgcc
tgtcaacgccaagattggcatgcgttagcccaattcaatgaatgcttagatggtttgact
caatttattcaaaagcatcagcgtgaacagggcaagtctttcgtgtcacgaactcgcata
cagccagcccgctataacaggcagcacaccacagtatttagggtcgtgcttgccaacccc
ttaactggacttgagatcttgcagggcgtcttagcagagcagcaagaaattgccgcttta
gataacgaatttttgccccagttattagcattagccagcgcctga

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