Shewanella denitrificans: Sden_2810
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Entry
Sden_2810 CDS
T00344
Name
(GenBank) tyrosyl-tRNA synthetase
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Sden_2810
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdn01007
]
Sden_2810
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdn03016
]
Sden_2810
03029 Mitochondrial biogenesis [BR:
sdn03029
]
Sden_2810
Enzymes [BR:
sdn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
Sden_2810
Amino acid related enzymes [BR:
sdn01007
]
Aminoacyl-tRNA synthetase
Class I (A)
Sden_2810
Transfer RNA biogenesis [BR:
sdn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Sden_2810
Prokaryotic type
Sden_2810
Mitochondrial biogenesis [BR:
sdn03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Sden_2810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
S4
S4_2
TyrRSs_C
Motif
Other DBs
NCBI-ProteinID:
ABE56089
UniProt:
Q12KD7
LinkDB
All DBs
Position
complement(3357494..3358690)
Genome browser
AA seq
398 aa
AA seq
DB search
MADLDQVLAEIKRGTDEILLEADLLAKLKEGRPLRIKLGADPTAPDIHLGHTVILNKMRT
FQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPAKTRIE
FNSSWLEPLGAAGMIRLASQQTVARMMERDDFKKRYASGQSIAIHEFMYPLLQGYDSVAL
KADVELGGTDQKFNLLMGRELQKAEGQKPQTVIMMPLLEGLDGVKKMSKSAHNYIGVSEP
ANEMFGKIMSISDDLMWRYYELLSFRPLAEIEQFKADVANGTNPRDVKIALAKEIIARFH
DEAQAQSAHQAFIDRFQKGAIPDDIEEITLEAGEGLGVANLLKDAGLVSSTSEAMRMIKQ
GAVKMDGEKLEDSRQTFAAGLEAVFQVGKRKFAKVTLK
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggccgatttagaccaagtattagcagagattaaacgcggtaccgatgagattttactc
gaagcggatctgctggcaaaactaaaggaaggccgtcctttacggataaagctgggcgcc
gatccgaccgcgcctgatatccacttaggccatactgtcattttgaataaaatgcgcact
ttccaagagttaggccatgaagtcatcttcttgattggcgactttactggcatggttggc
gacccaagtggcaaaaacagcactcgcccgcctctgactcgagagcaagtacttgctaac
gccgaaacctataaagagcaggtctacaagattttagacccagctaaaacccgtatcgag
tttaactcaagctggcttgagcctttgggcgctgctggcatgatccgccttgcatcacag
caaactgtggcgcggatgatggagcgtgatgattttaagaagcgttatgcttcgggtcag
tcgattgctatccatgaatttatgtatccactgctccaaggttatgattcagtagcctta
aaagccgatgttgaattgggcggcacggatcagaagtttaacttactcatgggccgtgag
ctgcaaaaagccgaagggcagaagccgcagacagtcatcatgatgccattgcttgaaggc
ttagatggcgtcaagaaaatgtcaaaatctgcccataactacattggcgtgagtgagcct
gctaatgagatgttcggtaagatcatgtcgatttcagacgatctcatgtggcgctattat
gaattgctatcattccgtccgctggccgaaatcgagcaattcaaagctgatgttgctaat
ggtaccaacccaagagacgtgaaaattgccttggcgaaagaaatcatcgcccgtttccac
gatgaagcgcaggcgcaatctgcgcaccaagcctttatcgaccgcttccaaaaaggcgcg
attcccgatgatatcgaagaaattaccctagaagcaggcgaaggcttaggggtggctaac
ttacttaaagatgcaggccttgttagctcaacctcagaagccatgcgcatgataaagcaa
ggcgcggtgaagatggatggcgagaagcttgaagacagccgtcagacctttgctgctggc
cttgaagctgtattccaagtgggcaaacgcaagtttgccaaagtgacgcttaaataa
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