Staphylococcus delphini: NCTC12225_01321
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Entry
NCTC12225_01321 CDS
T06587
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sdp
Staphylococcus delphini
Pathway
sdp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sdp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC12225_01321 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdp03400
]
NCTC12225_01321 (mutM)
Enzymes [BR:
sdp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NCTC12225_01321 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NCTC12225_01321 (mutM)
DNA repair and recombination proteins [BR:
sdp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC12225_01321 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
TOP1_ZnF
Zn_Tnp_IS91
zinc-ribbons_6
zf-TFIIB
Motif
Other DBs
NCBI-ProteinID:
VED62703
LinkDB
All DBs
Position
1:1333336..1334208
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AA seq
290 aa
AA seq
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MPELPEVEHVKRGITPHIIQQKIIDVTFSEPVKRGKLEGKETIIKGIGLDAFVKNTVGFE
ITDVQRRSKYILFRIQSGNVARTLISHLGMAGAFFVVQSLDDITIPNFRKHWQVVFHLEN
GIKLVYSDIRRFGEIRNVESLEAYPSILEIAPEPFEQEALAHYLAKSDEKKYLNKAIKPF
ILDHRVISGCGNIYACEALFDAQIHPEKKVKDLSVQEKTNLFNSVVKVLEMGILNGGTSV
SDYVHADGQRGTMQDHLKVYQQKRCATCETAIETVIISGRNTHFCPNCQS
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccagaagtcgaacatgtcaaacgtggcattacgcctcacattatacaa
caaaagattatagatgtgacgttttcggaacctgtcaaacgcggtaagttagaagggaaa
gaaacgattattaaagggattggtcttgatgcttttgtgaagaatacggtcggttttgag
ataactgatgtacaacgccgcagtaaatatattttgtttcgtatccaaagtgggaatgtt
gcacgtacattaatttcacatttagggatggcaggtgcattttttgtcgtgcaatcgctt
gatgacattacgataccgaattttcgaaagcattggcaagttgtgtttcatttagaaaat
ggtattaaattagtctattcagatattcgccggtttggtgagattcggaatgtcgaaagt
ttagaggcttatccttcaattttagagattgcgcctgaaccttttgaacaagaggcattg
gcccattatcttgctaaaagtgatgaaaagaaatatttaaacaaagcgattaagccattt
atactggatcatcgtgtgatatcgggttgtggcaatatttatgcgtgtgaagcgctgttt
gatgcacaaattcatccggagaaaaaagtaaaagacttgtcagtacaggaaaagacaaac
ttatttaatagtgtagtaaaagttttagaaatgggtattttaaatggtgggacaagtgtg
tcagattatgtacatgctgatggtcaaagaggaaccatgcaagatcatttgaaagtatat
caacaaaagcgctgtgcaacgtgtgaaacagcgatagaaacagttattatttcaggacga
aatacacatttttgtccaaattgccaaagttag
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