Sulfuricella denitrificans: SCD_n01293
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Entry
SCD_n01293 CDS
T02857
Name
(GenBank) UvrABC system protein C
KO
K03703
excinuclease ABC subunit C
Organism
sdr
Sulfuricella denitrificans
Pathway
sdr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sdr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SCD_n01293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdr03400
]
SCD_n01293
DNA repair and recombination proteins [BR:
sdr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SCD_n01293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UVR
GIY-YIG
HHH_5
HHH_2
HHH
HHH_3
Motif
Other DBs
NCBI-ProteinID:
BAN35122
UniProt:
S6B392
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All DBs
Position
1302150..1303892
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AA seq
580 aa
AA seq
DB search
MFNAGGEVIYVGKARDLKKRVSSYFQKTTLAPRTGLMVSQIAQIETTVTRTEGEALLLEN
NLIKALAPRYNVLFRDDKSYPYIMLSGHNFPRLGYFRGTPDKKNRYFGPFPNAGAVRESM
QLLQKVFRLRTCEDSVFNNRTRPCLLYQIKRCTAPCVGLIGGEGYHQDVMEAELFLEGKE
QQVLERLEAAMQAAAEAQRYEVAAVLRDQVMALRTIQEKQFVSGESGLDADVVACAATEG
VVCVNLVMIRGGRHLGDKSFFPKNADECDAVTALDAFLAQHYIGRSVPPLIIVSEKLDDA
MLAALLTEQAKRKVQISATPIGERRVWLRMALENARIAITQRLSQQSTQEARLQALIQAL
DIPEGTKRIECFDISHTMGEATVASCVVYDNYAMQNGEYRRYNISGITPGDDYAAMRDAL
TRRYRKIAAGEGCMPDLILIDGGKGQLGVAEEVMAEVGLSDVRLIGVAKGAERKVGLEQL
IFPDGEKALQLPADHIGLHLIQQIRDEAHRFAITGHRARRGKARLHSSLEDIGGVGAKRR
QKLLARFGGLKGVQAASVDELAQVEGISQMLAEKIYQGLH
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatgcgggtggagaggtgatttacgtcggcaaagcgcgcgatctcaagaaacgg
gtttcctcttactttcagaaaaccacactggcaccgcgcaccggactgatggtgtcgcag
atcgcccagatcgaaaccaccgtcacgcgcaccgaaggcgaggcgctgctgctggaaaac
aacctgatcaaggcgctggcaccccgctacaatgttctgttccgcgatgacaaatcctat
ccctacatcatgttgagtggccacaacttcccgaggctgggctattttcgcggcacgcct
gacaagaagaatcggtatttcgggccgttccccaatgccggcgcggtccgggagagcatg
cagctgttgcagaaagtgttccggctgcgcacctgcgaggacagcgttttcaacaaccga
acccgtccttgcctgctataccagatcaagcgctgcaccgcaccctgcgtcggcctgatt
gggggtgaaggctatcatcaggatgtgatggaggccgagttattcctggaaggcaaggag
cagcaggtgctggaacgcctggaagcggccatgcaggcggcggcggaggcgcagcgctac
gaggtggcggcggtgttgcgcgaccaggtcatggccttgcgcacgatccaggaaaagcag
ttcgtcagtggcgagagcggactggacgcggacgtggttgcctgcgccgcaacggaaggt
gtggtttgcgtcaatctggtgatgatccggggaggcaggcatttgggcgataaaagtttc
tttcccaagaatgccgatgagtgtgatgcggtcaccgcgctggacgcctttctggcgcaa
cactacatcggtcgctccgtgccgcctttgatcatcgtcagtgaaaagctggatgacgcc
atgctggcggcgctgctgacagagcaggcaaaacgaaaggttcagatcagcgccacccct
attggtgagcgacgagtgtggttgaggatggcgttggaaaacgcgcggatcgcgatcacg
cagcggctcagccagcaatctactcaggaggcacgattgcaggcgctgatccaggcgctg
gatattccggagggaactaagcggatcgagtgctttgatatcagtcataccatgggggag
gcgacggtggcgtcctgcgtggtgtacgacaactatgccatgcagaatggcgagtaccgg
cgctacaacattagcggcatcacgccgggagatgattatgccgccatgcgtgacgcactg
acgcgccgctaccgcaagattgcggcaggcgaggggtgcatgcctgatctgattctgatc
gacggaggcaaggggcaactgggagtggccgaggaggtgatggccgaggtggggttgagc
gatgtccgcctgatcggcgtggcgaagggggcggagcgcaaggtgggtctggagcagttg
atttttccggacggcgaaaaggcgctacaattacctgctgatcatatcgggctgcatttg
atccagcaaatccgcgacgaggcgcatcgcttcgccatcaccggacaccgggcgcggcgc
ggcaaggctcgcctgcattcttcactggaggatattggcggggtgggagcaaaacggcgg
cagaaattgctggcacgtttcggcggcttgaagggcgtgcaagccgccagtgttgatgaa
ttggcccaggttgaggggattagccagatgctggcggaaaaaatttaccagggacttcac
tag
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