Sulfuricella denitrificans: SCD_n02482
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Entry
SCD_n02482 CDS
T02857
Name
(GenBank) d-alanine/d-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
sdr
Sulfuricella denitrificans
Pathway
sdr00470
D-Amino acid metabolism
sdr00550
Peptidoglycan biosynthesis
sdr01100
Metabolic pathways
sdr01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sdr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SCD_n02482
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SCD_n02482
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SCD_n02482
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdr01011
]
SCD_n02482
Enzymes [BR:
sdr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
SCD_n02482
Peptidoglycan biosynthesis and degradation proteins [BR:
sdr01011
]
Precursor biosynthesis
Amino acid ligase
SCD_n02482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
ATP-grasp
ATP-grasp_3
ATPgrasp_ST
TTL
Neuropep_like
CPSase_L_D2
ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID:
BAN36289
UniProt:
S6AN81
LinkDB
All DBs
Position
complement(2538219..2539193)
Genome browser
AA seq
324 aa
AA seq
DB search
MTEKDDQGETRGFSPHPSPLTPHLFGKVAVLLGGKSAEREVSLKSGNAVLAALKRSGVDA
HAFDPSERELGELKRDGYQRVFITLHGGQGEDGTVQGALALLGIPYTGSGVLASALAMDK
WRSKLVWQAAGMPVPAYELLDAASDFAAVAVRLGLPLFVKPANEGSSVGISKVKSVADLR
AAFELAARYDDLVIAEQFVGGGEYTVAILGSEVLPVIKIEPANEFYDYEAKYLRDDTRYL
CPCGLSAEQESEIQRLAKQGYAIIGGAGWGRVDFLLDAAGKPYLLEANTSPGMTDHSLVP
MAARAAGLSFEDLVIKVLELASAG
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
ttgacggagaaagatgaccaaggggaaacccgggggttttcccctcacccctcacccctc
acccctcacctcttcggaaaagtcgcggtgctgctgggcggaaaatccgccgagcgtgag
gtgtcacttaaaagcggtaatgcagtgctggccgcgctcaagcgcagcggcgtcgatgcg
catgcgttcgatccgtccgagcgggagttgggcgagctgaagcgtgatggttaccagcgt
gtgtttatcaccctgcacggaggtcaaggcgaggatggtacggtgcagggcgcgctggcg
ctgctgggcattccctataccggcagcggtgtgctggcgtctgctctggcgatggacaaa
tggcgcagcaagctggtgtggcaggcggcgggaatgccggtacccgcctacgagttgctc
gatgccgccagcgatttcgcggcggtcgctgtgcgcctcggattgcctctgttcgtcaag
ccggctaacgagggctccagcgtcggcatcagcaaagtgaagtcagtcgcggatttgcgc
gccgcgttcgaactggcggcgcgctacgacgatctggtgattgccgaacaatttgtcggt
ggcggagagtacaccgtcgcgatcctcggcagcgaggttctgccggtgatcaaaatcgag
ccggccaacgagttctacgattacgaagcgaaatacctgcgcgacgacacccgctacctt
tgcccgtgcggtttatccgcagaacaggaaagtgaaattcagcgcctggcaaaacaaggc
tacgccataatcggcggcgccgggtgggggcgggtggatttcctgctcgatgcggcaggc
aagccgtacttgctggaagccaatacctcgcccggaatgaccgaccatagcttggtgccg
atggcggcgcgggcagcgggcctgagttttgaagatttggtgatcaaggttcttgaactg
gcgagtgcgggatga
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