Sulfuricella denitrificans: SCD_n02937
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Entry
SCD_n02937 CDS
T02857
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
sdr
Sulfuricella denitrificans
Pathway
sdr00860
Porphyrin metabolism
sdr01100
Metabolic pathways
sdr01110
Biosynthesis of secondary metabolites
sdr01120
Microbial metabolism in diverse environments
sdr01240
Biosynthesis of cofactors
Module
sdr_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
sdr_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
sdr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
SCD_n02937 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdr04147
]
SCD_n02937 (hemB)
Enzymes [BR:
sdr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
SCD_n02937 (hemB)
Exosome [BR:
sdr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SCD_n02937 (hemB)
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Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
BAN36736
UniProt:
S6AK55
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All DBs
Position
3005784..3006797
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AA seq
337 aa
AA seq
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MHALGKYPHKRMRRMRHDEFSRRLMRETLLTPADLIYPVFVLDGNNRSEQVASMPGVIRQ
TLDKLLHQAEECVKLGIPALAIFPVIDLPLKSLDAAEAYNPEGLVPRVVRALKQRFPELG
IITDIALDPYTIHGQDGLIDSNGYVLNDETVAVLVKQALTHAEAGADVVAPSDMMDGRIG
AIRNALDSQNHIHTRILAYSAKYASSFYGPFRDAVGSSANLGAGNKYTYQMDPANSDEAL
WEVGLDLEEGADMVMIKPGMPYLDIVRRIKDTYQAPTFVYQVSGEYAMLKAAAQNGWLNE
KACVLEALLGFKRAGADGILTYFALDAANWLMESKME
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgcacgctctgggcaaatatccacataaacgcatgcgccgcatgcggcacgacgagttt
tcccgtcgcctgatgcgcgaaacgctactgacgccagccgaccttatttacccggtattt
gtactggacggcaataaccgtagtgaacaggttgcctccatgcctggagtcatcaggcaa
accctggacaagcttcttcatcaggcggaagaatgcgtcaaactcggaatacctgccctg
gcgattttcccggtgatcgatctgcccctcaaaagtctggatgcagccgaagcttataac
ccggaaggcctggtaccccgagtggtgcgagcactgaagcaacgttttccggaattaggc
atcatcaccgacattgcgctggacccctacaccatccacggccaggacgggctgatcgac
agcaacggctatgttttgaatgacgagaccgtagcggtattggtaaaacaggctcttact
catgccgaggccggcgccgatgtggttgccccttctgacatgatggacggacgcatcggc
gcaatacgcaatgcgctcgatagtcagaatcacatccacacccgaattctggcttattcc
gccaagtacgcatcgagcttttacggaccattccgcgatgcggtcggctcctccgccaat
ctgggggcgggcaacaaatatacctaccagatggatccagccaacagcgatgaagccctg
tgggaagtggggctggacctcgaagagggggccgatatggtcatgatcaaacctggcatg
ccctatctcgacatcgttcgacgcatcaaggacacctaccaggcgcctacgtttgtttac
caggttagcggcgaatacgcaatgctcaaagcggccgcccagaatggctggctaaatgag
aaagcatgcgtgctggaagccttgctggggttcaagcgcgccggcgcggatggaatattg
acctattttgcgttggatgcggcgaactggctcatggaaagcaaaatggaatga
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