Streptomyces drozdowiczii: NEH16_08175
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Entry
NEH16_08175 CDS
T09042
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sdrz
Streptomyces drozdowiczii
Brite
KEGG Orthology (KO) [BR:
sdrz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdrz03016
]
NEH16_08175 (truB)
Enzymes [BR:
sdrz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NEH16_08175 (truB)
Transfer RNA biogenesis [BR:
sdrz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NEH16_08175 (truB)
Prokaryotic type
NEH16_08175 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
UZK54129
LinkDB
All DBs
Position
complement(1860638..1861540)
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AA seq
300 aa
AA seq
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MTTQNNRTPDGLVIVDKPSGFTSHDVVAKMRGIARTRRVGHAGTLDPMATGVLVLGVEKA
TKLLGHLALTEKEYLGTIRLGQNTVTDDAEGEITSSADASGVTREAIDAGVSALTGAIMQ
VPSKVSAIKIDGKRSYARVRGGEEFEIPARPVTVSSFHVYDVREAVAEDGTPVLDLVVSV
VCSSGTYIRAIARDLGAGLGVGGHLTALRRTRVGPYGLDAARTLDQHQEELTVMPVAEAA
ASAFPRWDVDEKRAKLLLNGVRLDMPAHPPGPVAVFGPDGQFLVLVEEQKGKAKSLAVFG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcagaacaacaggacgccggatggccttgtcattgtcgacaagccgtccggc
ttcacttcgcacgacgtcgtcgccaagatgcgcggtatcgcccgtacccgccgcgtcggc
cacgccgggaccctggacccgatggcgacgggcgtgctcgtgctcggcgtcgagaaggcc
accaagctcctcggccacctcgcgctgaccgagaaggaatacctgggcacgatccggctc
ggccagaacaccgtcacggacgacgcggagggcgagatcacctcgtccgccgacgcctcc
ggggtgacgcgcgaggcgatcgacgcgggggtctccgccctgaccggcgccatcatgcag
gtgccgtccaaggtcagcgccatcaagatcgacggcaagcggtcctacgcgcgggtgcgc
ggcggcgaggagttcgagatcccggcccggccggtgaccgtctcgtccttccacgtctac
gacgtccgcgaggccgtcgccgaggacggtacgccggtgctcgacctggtcgtctcggtg
gtctgctcctcggggacgtacatccgggccatcgcccgtgacctgggcgccgggctcggc
gtgggcggccatctgaccgccctgcgccgcacccgcgtcggcccgtacgggctggacgcg
gcgcgcaccctggaccagcaccaggaggagctgaccgtgatgccggtggccgaggccgcc
gcgtcggcgttcccccgctgggacgtggacgagaagcgggcgaagctgctgctgaacggc
gtacgcctggacatgcccgcccacccgccgggaccggtcgccgtcttcgggcccgacggg
cagttcctggtgctggtcgaggagcagaagggcaaggccaagagcctcgccgtcttcggc
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