Seriola dumerili (greater amberjack): 111218820
Help
Entry
111218820 CDS
T05606
Symbol
hdac4
Name
(RefSeq) histone deacetylase 4
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
111218820 (hdac4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdu03036
]
111218820 (hdac4)
Enzymes [BR:
sdu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
111218820 (hdac4)
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
111218820 (hdac4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
111218820
NCBI-ProteinID:
XP_022597018
LinkDB
All DBs
Position
Unknown
AA seq
1059 aa
AA seq
DB search
VDHPHHHHHQQPPFGLVPQTHPIPPTSTACPASAEPGRGPVIGHPEQQLQQELVALKHKQ
QLQRQLLIAEFQRQHEQLSRQHEAQLQEHIKHQQDLLALKHQQELLEHQRKMEQQRQEQQ
LEKQQREHKLHQLKNKERGQESAVASTEVKMRLQEFVLNKKKALAQRNINHCLPSDPRYW
YGKTQHSSLDQSSPPQTALSAYNHPMLGTYDSKDDFPLRKTASEPNLKVRSRLKQKVTER
RSSPLLRRKDGPITTAKKRSLDVAESACNSAPGSGPSSPNNSSSNIPSENGVTISSSPGE
ASLLQRLAAREGSVSQLSLYTSPSLPNITLGLPAPGLANTVVSGHQDGESHLPALQQGIP
LTPPFLPTAHLPSYLASSTLDREGAGGGTTGHNPLLQHMVLLEQSHNPMVGLGGLPLPSP
TVSKLARGHRPLGRTQSAPLPQQQCGQAQALQQLVVQQQHQQFLEKHKQLFQQQQQQHII
NKIMSKPSDQVSAAGSSASGPARQHQSHPEETEEELREHQGLSSSSSSSSSTSVQETGPL
RGLVIKQEPPDIQEQEEREQRERQAEQDFLFRQQALLLEQQRIHQLRNYQASMEAAGLSV
SFAGHRPLSRAQSSPASASFPMVVQEPPAKPRFTTGLVYDSLMQKHQCMCGNTTSHPEHA
GRIQSIWSRLQETGLRVHCECIRGRKALLEELQTVHSEAHVMLYGTNPLRQKLDCSVSPI
FVRLPCGGIGVDSDTIWNEVHSSSAARLAVGSVVELVFKVASGELKNGFAVVRPPGHHAE
ESTPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYSDPSVLYLSLHRY
DDGNFFPGSGAPDEVGSGAGVGFNVNMAFTGGLEPPMGDAEYLAAFRTVVMPIANEFAPD
VVLVSSGFDAVDGHAPPLGGYKLTAKCFGYLTRQLMGLAGGRLVLALEGGHDLTAICDAS
EACVSALLGNELDPIPDEVLQQRPNANAVHSMEKVIEVQSKYWRSLQRSASTLGCSLSEA
LQRDAEEAETVSAMASLSVANKHIGKRAEEEPMEEESPM
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
gtagaccaccctcaccaccaccaccaccagcagcctccctttggcctggttccccaaacc
caccctataccgcccacctccacagcatgccccgcatcagccgagccgggccgcgggcca
gtcattggccacccggagcagcagctgcagcaggagctggtggcactgaaacataagcag
cagctccagagacagctactgatcgcagagttccagaggcagcatgaacagctgtcacga
caacatgaagcccagcttcaggaacacatcaagcaccaacaggatttactggcactcaaa
caccaacaggagcttttggagcatcagaggaagatggagcagcaacgtcaggagcagcag
ctggagaagcagcagcgggaacacaaactccaccagctcaaaaacaaggagaggggacag
gagagtgcagttgccagtacagaggtaaagatgcggcttcaggagtttgtcctgaacaag
aagaaagccctggctcagcgaaatataaaccactgtctgcccagcgacccgcgctactgg
tatggaaaaacccagcacagctctttggaccagagctctcctccccagacggcgttgtca
gcgtacaaccacccaatgctgggcacatatgactcaaaagacgacttccctctccgcaaa
acagcctccgagcccaacctgaaggttcgttccaggctaaagcagaaggtgaccgagcgc
cgcagcagccctctgctgcgcaggaaagatggtccaatcactactgccaagaagcgttcc
ctagacgtggccgagtctgcatgcaacagtgcgccaggctcaggtcccagctcccccaac
aacagctccagtaacatccccagtgagaacggggtcaccatctccagcagcccaggagag
gcctccctgcttcagagattggctgcaagggaaggttcagttagccaactctctctatac
acctccccttctctacccaacatcaccctgggactgccagccccaggcctcgctaacact
gtggtatcaggacaccaagatggtgagagtcatctgcctgcgttacagcagggcattcct
ctgacccctcctttcctgcccactgcccacctgccctcctacttggcatcttcaacgctg
gacagggagggggctggagggggcacaactggtcacaacccccttctccaacacatggta
ctgctggagcagagccataatccaatggttggtctgggtggtcttccgctaccgtcacct
actgtctccaagcttgcgcggggccaccgtcccctggggagaacccagtcggcccctctg
ccccagcagcagtgtggacaggcccaggccctgcagcagctggtggtccagcagcagcac
cagcagttcctggagaaacacaaacagctgttccaacagcagcagcaacagcacatcatc
aacaagataatgtccaagcccagcgatcaggtctcagccgcaggctccagcgcgtcaggg
ccagccaggcagcatcagagtcacccagaggagacggaagaggagctcagggagcaccag
gggctgtcctcctcatcatcgtcgtcctcctctacctctgtgcaggagacggggccacta
cggggtttggtcatcaagcaggagcccccagacatccaggagcaggaggagagggagcag
agggagagacaggctgagcaagatttcttgttcagacagcaggctctgctgttagagcag
cagcggattcaccagttgaggaactaccaagcctccatggaagcggccgggttatcagtc
agctttgcaggacaccgccccctctccagggctcagtcatctccagcgtctgcctccttc
cccatggtagtacaggagccgcctgccaagcctcgatttactacaggtctggtgtatgac
tctttaatgcagaagcaccagtgtatgtgcggcaacaccaccagccacccggagcacgct
ggacgcatccagagtatctggtcccgactacaggaaacaggcctaagggtgcactgtgag
tgtatccgcggtaggaaggccttactggaggagttacaaacagtccactctgaagcccac
gtcatgctgtacggaacaaacccgctgcggcagaaactagactgttcagtgagtcccata
tttgtgaggttaccatgcggaggcataggggtggacagcgacaccatttggaatgaggtc
cattcgtccagtgcggctcgtctggctgttggctcagtggtggagctggtcttcaaagtg
gcatcaggggaactgaagaacggctttgctgtggttcgaccacctggacaccatgcggag
gagagcacgcctatgggcttctgttacttcaactcagttgccattgcagccaagctcttg
cagcagaggctcaatgtcagtaaaatcctcattgtggactgggatgttcatcatggaaat
ggcacccagcaggctttctactccgatcccagtgttctttatctgtcgctgcatcgctac
gatgatggaaacttcttcccaggcagcggagcacctgacgaggtgggcagtggagcaggt
gtcggcttcaatgtgaacatggcctttaccggaggactggaacctcccatgggggatgca
gagtatcttgctgcattcaggacggtggttatgcctattgccaacgagtttgccccagac
gtggttctggtgtcttcaggctttgacgcggtagatggacatgctccacccctgggagga
tacaaactgacagccaaatgcttcggctacctgaccaggcagctgatgggtctggcaggc
ggtcggttggtgcttgccctggaggggggtcatgacctcacagccatatgcgatgcctcc
gaagcctgcgtctctgctctgcttggcaatgagttggaccccatccctgatgaggtgctg
cagcagaggccaaatgccaacgctgttcactccatggagaaagttattgaagttcagagt
aaatactggcgctcactgcaacgctccgcctccacgcttggttgctcgttgagcgaagcc
ctccagcgagacgcagaggaagccgagaccgtctccgctatggcctcgttgtctgttgcc
aacaagcatattggaaagagggctgaagaggaaccaatggaggaggaatctcctatgtaa
DBGET
integrated database retrieval system
