Seriola dumerili (greater amberjack): 111219336
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Entry
111219336 CDS
T05606
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM39-like
KO
K12012
tripartite motif-containing protein 35
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdu04121
]
111219336
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111219336
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-RING_UBOX
SPRY
zf-C3HC4
zf-B_box
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-RING_2
zf-RING_5
zf-Nse
zf-rbx1
zf-RING_6
zf-ANAPC11
Prok-RING_4
UPF0242
TMPIT
PIN_8
zf-RING_10
DUF4200
DUF4618
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
111219336
NCBI-ProteinID:
XP_022597692
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MASRSEEDFCCPVCHEVFRDPVVLSCSHSFCKDCLKSWWRERPTRECPVCRTRSSRKEPP
VSLTLKNLCEAFKQERDQRSSESLCSLHSERLKLFCLDHQQPVCLVCRDSEKHTNHRFRP
IDEAAPQHKKELQETLELLKKKLKGCEKVKEEFDQSAEHIKVQAQHTERQIKEQFKKLHQ
FLEEEEEARITALREEEEQKSQMMKEKMEALSREIAALSHTVRATEDELRAEDVSFLKNY
KVTVERVQQRLLLDDPQLDSGALIDQAKHLGNLTFNIWNTMKDMVSYTPVVLDPNTAHPE
LILSEDLTSVRRVQRQKLPDNPERFDNYLIVLSSEGFNSGTHSWDVEVGDNTNWSLGLLE
ESVQRKRPTQSGFWRIGFYEGKYSVHAPPASAIDLSVQKKLQRIRVNLDWNRGRLSFSDP
DTNTHIHTFTHTFTEKLFPYIRTIDEPKISPLKSSPLKISPLKVSVRLQQSS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaggtcagaggaggatttctgctgtcctgtctgtcatgaggtctttagagat
cctgttgttctgtcatgtagccacagcttctgtaaagactgtctgaagagctggtggaga
gagagaccaacgcgtgagtgtccagtttgtaggacaagatcttcaaggaaagaaccacct
gttagtctgacattaaagaacctgtgtgaggccttcaaacaggagagagatcagagatct
tcagagtctctctgcagtctgcactctgagagactcaaactcttctgtctggaccatcag
cagccagtttgtctcgtctgcagagattcagaaaaacacaccaaccacagattcagaccc
atcgatgaagctgctccacaacacaagaaggaacttcaggaaactctggagctcttaaag
aagaagttaaagggttgtgaaaaagttaaagaggagtttgatcaatcagcagaacacatt
aaggtccaggcccaacacacagagaggcagattaaggagcagtttaagaagcttcaccag
tttctagaggaggaagaggaggccaggatcactgctctgagggaggaagaggagcagaag
agtcagatgatgaaggagaagatggaggctctgagcagagagatagcagctctgtcacac
acagtcagagccacagaggacgagctgagagctgaagacgtctcattcctgaagaactac
aaggttacagtggaaagagtccagcagcgcctcctgctggatgatccacagctggactca
ggagctctgatagaccaggccaaacatctgggcaacctgaccttcaacatctggaacacg
atgaaggacatggtctcctacactcctgtggttctggacccaaacactgctcatccagaa
ctcatcctgtctgaggatctgaccagtgtgagacgagtacagagacagaagcttcctgac
aatccagagaggtttgataactacctcattgtcctgagctctgagggttttaactcaggg
actcacagctgggatgttgaagttggagacaatacaaactggtcactgggtttgttagaa
gagtctgttcagaggaagagaccgacacagtctggattctggagaataggtttctatgaa
ggtaaatactcagtacatgcaccaccagcctccgccattgatctgtcggtgcagaagaag
ctccagaggatcagagtgaatctggactggaacagaggaagattgtcgttctctgatcct
gatactaacacacacatacacaccttcacacacactttcactgagaagctgtttccatac
attagaactattgatgaaccgaagatctcaccactgaagagctcaccactgaagatctca
ccactgaaggtctctgtgagattgcaacagagcagttag
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integrated database retrieval system
