Seriola dumerili (greater amberjack): 111222823
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Entry
111222823 CDS
T05606
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D-like
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04010
MAPK signaling pathway
sdu04020
Calcium signaling pathway
sdu04218
Cellular senescence
sdu04260
Cardiac muscle contraction
sdu04261
Adrenergic signaling in cardiomyocytes
sdu04270
Vascular smooth muscle contraction
sdu04530
Tight junction
sdu04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111222823
04020 Calcium signaling pathway
111222823
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
111222823
09144 Cellular community - eukaryotes
04530 Tight junction
111222823
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
111222823
09153 Circulatory system
04260 Cardiac muscle contraction
111222823
04261 Adrenergic signaling in cardiomyocytes
111222823
04270 Vascular smooth muscle contraction
111222823
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdu04040
]
111222823
Ion channels [BR:
sdu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
111222823
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
111222823
NCBI-ProteinID:
XP_022602399
LinkDB
All DBs
Position
Unknown
AA seq
2119 aa
AA seq
DB search
MSANGPAPDPAPAAPEAPPASTPAPAPVPAPAPAAPPAPPAPPAPAATTIPVGALAQKKR
QQYAKSKKQGSNANSRPPRALFCLNLNNPIRRACISLVEWKPFDIFILIAIFANCMALAV
YVPFPEDDSNSTNHDLETVEYAFLIIFTIETFLKIIAYGLVMHQNAYVRNGWNMLDFVIV
VIGLFSVVLELLTKEEKGDGEGDKEHPSMHGHGGKPGGFDVKALRAFRVLRPLRLVSGVP
SLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHATCFIPGSDAIAEEEPA
PCAISGHGRQCPINGTECREGWQGPNGGITNFDNFLFAMLTVFQCITMEGWTDVLYWMND
AMGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDL
KGYLDWITQAEDIDPDNEDEADEESKRNRVTLADLTEKKKGRFGWFSQSSDTHASVPASE
TESVNTENQNGEDEKTPCCGPLCQKISKSKFSRRWRRWNRFCRRKCRLAVKSVPFYWLVI
ILVFLNTLTISSEHYNQPLWLTQVQDVANKVLLALFTCEMLVKMYSLGLQAYFVSLFNRF
DCFVVCGGITETILVELEIMSPLGISVFRCVRLLRIFKVTRHWQSLSNLVASLLNSMKSI
ASLLLLLFLFIIIFSLLGMQVFGGKFNFDETQTKRSTFDNFPQALLTVFQILTGEDWNAV
MYDGIMAYGGPSSSGMIVCFYFIILFICGNYILLNVFLAIAVDNLADAESLNTDEGDKKD
TLTPTSHCLLDCKEEEEDNDDTAAEEEDPEVPSGPRPVISELVKKEKITPIPEGSAFFIF
SSTNPFRVFCHKLINHHIFTNLILVFIMLSSVSLAAEDPIRNFSARNIILGYFDYAFTAI
FTVEIVLKMTTYGAFLHKGAFCRNYFNLLDLLVVGVSLVSFGIQSSAISVVKILRVLRVL
RPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDEAK
SSPEECKGTYILYKDGDVNQPTIHRRLWHNSEFNFDNVLMAMMALFTVSTFEGWPSLLYK
AIDSNRENLGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEKEYKNCELD
KNQRQCVEYALKARPLRRYIPKNPYQYKFWYVVNSTGFEYIMFVLIMLNTLCLAVQHYGQ
STTFNYVMDILNMVFTAVFTVEMVLKLIAFKPRHYFADAWNTFDALIVVGSVVDIAITEV
NPTETPQVDEMGNTEDSARISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYV
ALLIAMLFFIYAVIGMQVFGKIAMVDGTHINRNNNFQTFPQAVLLLFRCATGEAWQEIML
ACMPGKLCDPESDYNPGEEMTCGSGFAIVYFITFYMLCAFLIINLFVAVIMDNFDYLTRD
WSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVA
MNMPLNSDGTVMFNATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKRTSMKLLDQVV
PPAGDDEVTVGKFYATFLIQDYFRKFKKRKEEGLVGAHPSQNNTAIALQAGLRTLHDIGP
EIRRAISCDLQDDELVDFIPEEDEEIYRRNGGLFGNHLMNGGHRRSNGHQTNATQRPLQV
QPPPHYAHMEQPVGRLSRANAMSHPNHHHHHHHHHHRHHNSYGKSPKSTNINLNNANVSS
LPNGGHHRYYEHAPPNGYPGLRSSYYDYDKPRTPQGQRRRYYETYVRSHGGDGRHPTIRR
EEEFDEDRYSGEYYSGEEFYEDDSMLSGDRYQNSDTEYETPKGYHHPDSYYDDDEQPLYR
DSRRSPKRRLLPATPQGHRRPSFNFECLRRQSSQDELPHQRTALPLHLMQHQVMAVAGLD
SSRAHRLSPTRSTRSWATPPATPASKDQSPYYTPLIRVDQQHRGSTASSHVSVRKSSWYT
DDPEYSQRTYSPVHLQVPPEFHNQYHQKRGSATSLVEAVLISEGLGRYAKDPKFVAATKH
EIADACEMTIDEMESAASHLLNGGMAPGVNGVNVFPLLTPRDYELQDTAASYSDEEPETE
PRAPYEEDLADEMICITTL
NT seq
6360 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccaacgggccagccccagaccctgccccagcggccccagaagcccctcctgcc
tctacccctgcccctgctccggtcccagccccagcccccgcggcaccacccgctcctcct
gccccgcctgccccagcggccactaccatcccggtaggtgcgttggcacagaagaagcgg
cagcagtatgccaaaagcaagaaacaaggcagtaacgccaacagcaggccaccgagggct
ctgttctgcctcaacctcaacaaccccatacgcagggcctgcatcagcctggtggagtgg
aagccatttgatatctttatattaattgctatttttgccaactgtatggccttagctgtc
tatgtccccttccctgaagatgattccaactccacaaaccatgacctggaaacagttgag
tatgccttcctcatcattttcacaattgagacctttctgaagattattgcttatggtttg
gtgatgcaccagaacgcgtacgtgaggaatggttggaacatgctggatttcgtcattgtt
gtcataggactcttcagtgttgtcttggagcttttgaccaaagaggagaagggagatggc
gagggagataaagaacacccgtcgatgcacgggcatgggggtaaaccaggtggatttgat
gttaaagcccttcgagccttccgtgtgctgcgacccctgcggctggtctcaggagtaccc
agtttacaggtggtgttgaactccatcattaaagccatggtccctctccttcacattgcc
ctcttggtcttgtttgtcattatcatctatgctattatcggcctggagcttttcattggc
aaaatgcacgcaacctgctttattcctggctcagatgcgatagcagaggaggaaccagct
ccgtgtgcgatctcagggcacgggcgccaatgccccatcaacggcacagagtgcagggaa
ggctggcaaggtcccaacggtggcatcaccaactttgacaacttcctgtttgccatgctg
acagtgtttcagtgtatcaccatggagggctggacggatgtgctgtactggatgaacgat
gctatgggctttgagcttccatgggtgtactttgtcagtcttgtgatcttcggctccttt
ttcgttcttaacctggttttgggtgtgttgagcggagagttctccaaggagagagaaaag
gccaaagctcgtggagacttccagaagctgcgtgagaagcagcagctggaggaggatctg
aagggttacctggactggatcactcaggctgaagacatcgaccccgacaacgaggatgag
gccgatgaggagagcaagcgcaaccgggtgactctggctgaccttacagagaagaagaag
ggaaggtttgggtggttcagccagtcgtccgacactcatgcgagcgttccagccagtgaa
acagagtccgtgaacaccgagaaccaaaacggggaagatgaaaagacgccatgctgcgga
cctctgtgtcaaaaaatttcgaagtcaaagttcagtcggcgctggcgccgctggaacagg
ttctgccgcaggaagtgccggttggctgtcaaatcggtgcctttctattggctggtcatc
atcctggtgttcctcaacaccctcaccatatcatcagagcattacaaccagcccctgtgg
ctgacacaagtgcaggatgtggccaacaaggtgctgttagccctgttcacgtgtgaaatg
ttggtgaagatgtacagtctggggctacaggcctattttgtttcactgttcaaccgcttt
gactgcttcgtggtgtgtggaggaatcactgaaaccattctggtcgagttggaaatcatg
tctcccctcggtatctctgtgttccgctgcgtccgtctgctgaggatcttcaaggtcaca
cggcactggcagtctctgagtaacctggtggcgtctctgctcaactccatgaagtccatt
gcttccctgctgctgctgctcttcctcttcatcatcatcttctccctgctgggcatgcag
gtgtttggtggaaagttcaactttgacgaaacccagaccaagaggagtaccttcgacaac
tttccccaagctcttctcactgtgtttcagatcctgaccggagaagactggaacgctgtt
atgtatgatgggatcatggcgtacggaggcccttcctcctctgggatgattgtgtgcttt
tacttcatcatcctcttcatctgtggaaactatatcctgctgaatgtcttcttggctatc
gctgtggacaacttggcagacgcagagtctctcaacacagacgaaggagacaagaaagat
acgctgacaccgacttcacactgtctgcttgactgtaaggaggaggaggaggacaatgat
gatacagcagcggaggaggaggatccagaagtaccatcggggcctcggccagtcatctct
gagctggtaaagaaggagaagatcactcctatcccagagggaagtgccttcttcatcttc
agcagcacaaacccgtttcgcgtgttttgccacaaactcatcaatcatcacatattcacc
aacctcatcctggtgttcatcatgctcagctccgtctctctcgctgccgaggatccgatc
cgaaacttctcggctcgcaatattatacttggttactttgactatgctttcacggctatc
tttactgttgagatcgttttgaagatgacgacgtacggagcttttctccataaaggcgca
ttctgcaggaattacttcaaccttcttgacctgttggtggtgggagtttcccttgtctcc
tttggcattcagtcctcagccatctcagtggtgaagattcttagggtccttcgtgttctt
cggcccctgagggccatcaacagagccaaaggcctgaagcacgtggtgcagtgtgtgttt
gtggccatcagaaccatcggtaacatcatgatcgtcaccactctgctgcagttcatgttt
gcctgtataggtgtgcagctatttaagggaaaattctatcgctgcaccgatgaagccaag
tccagcccagaagagtgcaagggcacctacatcctgtataaggatggagatgtgaaccag
ccaaccatccacagacgactgtggcacaacagtgaattcaattttgacaacgtcctcatg
gctatgatggctctgttcactgtgtccacgtttgaaggctggccttcgttactatacaag
gccatcgactccaacagggagaacctcggccccatttacaactaccgtgtggagatttcc
atcttcttcatcatctacatcatcatcattgctttttttatgatgaacatctttgtaggt
tttgtgatcgtcacgtttcaggaacaaggagagaaagagtacaaaaactgtgaactggac
aagaaccagcgtcagtgtgtggagtacgctcttaaggcgcgtccgctgaggaggtacata
cctaagaacccgtaccagtacaagttctggtatgtggtgaactccactgggtttgagtac
atcatgtttgtgctcatcatgctcaacacactctgcctcgctgtacagcactatggccaa
tcaacgacatttaactatgtaatggacattctcaatatggtcttcactgctgtcttcact
gtggaaatggttctcaaactcatcgctttcaagcccaggcactatttcgctgatgcttgg
aacacatttgatgccttaattgttgttggtagcgtcgtcgatattgctatcactgaagtt
aatccaacggagactcctcaggtggatgagatggggaacacagaggacagcgctcgcatc
tccatcaccttcttccgtctgtttcgagtcatgcggctggtcaagctcctgagcagaggg
gagggcattcgcaccctgctttggactttcatcaaatccttccaggctctgccatatgtt
gctcttctgatagccatgctgttcttcatctacgctgtcattggcatgcaggtgtttgga
aagattgcaatggtggacggcacacacatcaacagaaacaacaacttccagaccttccct
caggccgtgctgcttctgttcaggtgtgccactggagaggcgtggcaggagatcatgttg
gcctgtatgcccgggaaactgtgtgacccagagtcggactacaaccccggggaggagatg
acgtgtggcagtggatttgcaatagtttacttcatcaccttctacatgctctgcgccttc
ttgattattaatttgtttgtggccgtcatcatggataactttgactatctgacacgtgat
tggtccattcttggtcctcaccaccttgatgaattcaagagaatttggtcagagtacgac
ccagaggccaaaggcagaattaagcatctggatgttgtaacccttcttcgtcgtattcag
ccgcctctcggctttggcaaactgtgccctcacagagtggcttgcaagaggctggtagcc
atgaacatgcctctgaacagtgacggcacagtcatgtttaatgccactctgtttgcactg
gtgcgaacggccctgaagatcaaaacagaaggtaatctagagcaggccaatgaagagctg
cgagctgtcatcaagaaaatctggaaaagaaccagcatgaagctgctggatcaagtggtg
cctcctgctggtgatgatgaggtaaccgtggggaagttctatgccaccttcctgatacag
gactactttaggaaattcaagaaacgtaaagaggaaggcctggtgggtgctcacccctcc
cagaacaacacagccattgctttacaggctggccttcgcacgctgcatgatattgggccc
gaaattcgccgagcgatatcatgtgatctgcaagatgacgaactagtagactttattcca
gaggaagacgaggaaatttataggcgtaatggcggactcttcggtaaccatctcatgaac
ggcggtcatcggcgatccaacggccaccagaccaacgccacacagcgacctctgcaggtg
cagccccctcctcactacgcccacatggagcagccggtgggacgcctgtctcgagccaac
gcaatgtcccaccccaaccaccatcatcaccaccaccaccatcaccaccgccaccacaac
tcctatggcaagtctcccaaatccaccaacatcaacctcaacaatgccaacgtgtccagt
ctgcccaacggaggacaccatcgctactatgagcacgcacctcccaatggctacccaggt
ctacgcagctcctactacgactatgacaagccgcggaccccccagggtcaaagaaggcgc
tactatgagacgtatgttaggtcccatggaggggatggacgccaccccaccatccgcagg
gaggaggagtttgatgaagaccgctactctggggagtattacagtggggaggagttttac
gaagatgacagtatgctgtcaggggacaggtatcagaacagtgacacggagtatgagact
cccaaaggttaccatcaccctgacagttactatgacgatgatgagcagcctctctaccgc
gactcgcgcaggtcaccaaagagacggctgcttcctgccacacctcaaggtcacaggagg
ccatccttcaactttgagtgtcttcgcagacaaagtagccaggacgagcttccacatcag
cgtactgctctaccactgcaccttatgcagcaccaggtaatggctgtagcaggcctggac
tccagcagagcccatcgcctctccccgacccgctccacccgctcctgggcaactccccct
gccaccccggccagtaaagaccagtcaccatactacacccctctcatccgtgtggaccag
caacacagggggagtactgctagcagccatgtgtctgtgcgcaagagctcctggtacaca
gatgaccccgagtactctcagaggacgtactcacctgtccacctgcaggtgccacctgag
ttccataaccagtaccaccagaagagaggcagcgcaaccagcctagtggaagcggttttg
atatcagaggggcttgggagatacgccaaggatcccaagtttgtcgctgcaacaaagcat
gagatagcagatgcatgtgagatgacgatagacgaaatggagagtgccgccagccaccta
ctgaacggagggatggccccgggcgtcaacggggtcaacgtgtttccccttctgactcca
agggactatgaactgcaggacaccgcagccagctacagcgacgaggagccagagacagaa
cccagagctccttatgaggaggacctggcagatgagatgatctgcatcacaactttatag
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integrated database retrieval system
