Seriola dumerili (greater amberjack): 111235435
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Entry
111235435 CDS
T05606
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent L-type calcium channel subunit alpha-1D-like
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04010
MAPK signaling pathway
sdu04020
Calcium signaling pathway
sdu04260
Cardiac muscle contraction
sdu04261
Adrenergic signaling in cardiomyocytes
sdu04270
Vascular smooth muscle contraction
sdu04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111235435
04020 Calcium signaling pathway
111235435
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
111235435
09153 Circulatory system
04260 Cardiac muscle contraction
111235435
04261 Adrenergic signaling in cardiomyocytes
111235435
04270 Vascular smooth muscle contraction
111235435
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdu04040
]
111235435
Ion channels [BR:
sdu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
111235435
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
111235435
NCBI-ProteinID:
XP_022619621
LinkDB
All DBs
Position
Unknown
AA seq
2075 aa
AA seq
DB search
MYEESRKSAGRNGYTNTVDGEEGGGEGEEEEEGEEGDGGGEGGGGDEERDAEWDEELDGE
NEGGVRMTRTDTLHSTTSSTGTQRKRGQHAKKQVQGSNQVQRAPRALYCLKLNNPIRRAA
LSIVEWKPFDIFILLAIFANCVALGVSKPFPEDDSNSTNHDLEQVEYVFLIIFTVETFLK
ILAYGLVMHPSSYIRNGWNLLDFVIVIVGLFSVVLETMTHKSGEQATTHHVPGKPGGLDV
KALRAFRVLRPLRLVSGVPSLQIVLNSIMKAMVPLLHIALLVLFVIIIYAIIGLELFIGR
MHRTCYYIGTDNYVEDDPVPCAFAGHGRQCAINGSECRGRWDGPNGGITNFDNFFFAMLT
VFQCITMEGWTDVLYWMNDAIGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKA
KARGDFQKLREKQQMEEDLCGYMDWITQAEDMDELDEDGNPRPSLGDLSDKKRGKFGWFS
HSNETHASLPASETASENTENIDEEHTNCCQACCARMMKISCCRTLRRWNRVCRRNCRTA
VKSVTFYWLVLLLVFLNTSLSASEHYNQPNWLTQVQDIANKVLLSLFTVEMLLKMYSLGL
AHYFVAFFNRFDCFVVCGGIMETILVELEIMPPLGISVLRCVRLLRIFKVTRHWTALSNL
VASLLNSMKSIASLLLLLFLFLIIFALLGMQLFGGKFNFDETQTKRSTFDAFPQALLTCF
QILTGEDWNVVMYDGIMAYGGPVFPGMIVCVYFVILFICGNYILLNVFLAIAVDNLAGGD
GDDKKEEKKEEGAVEEEAEEGEVDIDADTEYEEEEELPEGDEDGGDQLKMADLAPPKEKI
LPIPEGSAFFCLSKTNPIRVGCHTLIHHHIFTNLILVFIILSSCSLAAEDPIRAHSFRNN
ILGYADYAFTSIFTVEILLKMTVHGAFLHQGSFCRNWFNLLDLLVVSVSLVSFFLHSSAI
SVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLF
KGKFYRCTDEAKHTPEQCKGTFVVYKDGDVSHPMVRERLWHNSDFNFDNVLMGMMALFTV
STFEGWPALLYKALMRNRENSWPSTTYRSKISIFFIIYIIIIAFFMMNIFVGFVIITFRE
QGEQEYKNCELDKNQRQCVEYALKAQPLKLYIPKNPVQYKFWSIINSTGFEYVMFVLILL
NTVTLAVQHYEQSKTFSYIMDILNMVFTGLFTVEMLLKLLALRLRHYFIDAWNSFDALIV
VGSVVDIVVTEFSSGEDSSRVSITFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSLQALPY
VALLIAMIFFIYAVIGMQTFGKIAMQDHTQINRNNNFQTFPQAVLLLFRCATGEAWQEIM
LASLPGKRCDPESDYEPGEEFTCGSNFAIVYFISFFMLCAFLIINLFVAVIMDNFDYLTR
DWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVALLRRIQPPLGFGKLCPHRVACKRLV
AMNMPLNADGMVTFNATLFALVRTALKIKTEGNPEQENEELRGIIKKIWKRMKPKLLDEV
IPPHEEEEVTVGKFYATFLIQDYFRKFRKRKEKGTLPGESDATNPSAIQLCKAGLKTLQD
LGPEMRLALNEDLEEEEEAMMEDEELEENTTYKGENGFGPEKDRRGSILTTPTGPGGVVG
DGAVSNGGLIHRVGSLTKMQNGSENEEHLYRGDNMRSSVNHHHHRPSVKNGLLDHAQKRP
SYYKQHGRRDSRDRYWRNGDMEAYGEQGYYSREEDNDSITSRDRHYPDEPPLYRDHYDGH
APYTNSSYGNGYSDGRRTTRRRLLPATPTGRKPSFNIQCLRRQGSSDDLPIPGTYHPTSP
PRRARTQTFSSYESRHSSGRSSAASSASWANPCPRRGRLLYAPLILVEEEGSPPWGGGGG
GPGGEGKKEGAGRGVSVTGAAPRPAWYGGPVGTSAPPPYRAYTTLRVPSQLGAQFTEKRG
SADSLVEAVLISEGLGLYARDPKFVAFAKREIADACHMTVDEMESAASDLLGSGSHGFLG
NAAADPAALYSDEEPIRTGRDEDELADEMTCVTSF
NT seq
6228 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaggagagccgcaaaagtgctggtcgtaatggctacaccaacacagtggatggg
gaggagggaggaggggagggggaggaagaggaggagggagaagagggagatggaggagga
gagggaggaggaggagatgaggagagggacgcagagtgggatgaagagctggatggagag
aacgagggaggtgtgaggatgacgagaacggacacgcttcactcaaccacaagttcgacc
ggaacacagagaaagagaggacaacacgctaagaaacaggtgcagggcagtaatcaggtc
cagcgagctcctcgagcattgtactgtctgaaactcaacaatccaatcagacgagctgct
ctctccattgttgagtggaaaccgtttgacatctttatccttttagccatcttcgctaac
tgtgtcgctctgggagtttccaaaccgttccctgaggacgactccaactccaccaaccac
gacctggaacaagtggagtacgtcttcctcatcatcttcactgtggagaccttcctgaag
atcctggcctacggtctggtgatgcaccccagctcctacatccgcaacggctggaacctg
ctcgatttcgtcatcgtcattgtcgggttgttcagcgtcgtcttggaaacaatgactcat
aagtcaggcgagcaggcaaccactcaccacgtgccagggaagcctggaggtctggatgtc
aaagccctgagagcgttcagagtcctgaggccgctcagactggtctctggagtcccgagt
ctgcagattgtgttgaactccatcatgaaggcaatggttcctctgctccacattgctctg
ctggttctgtttgtcatcatcatctacgccatcatcggtctggagctcttcatcggacgc
atgcacagaacctgctactacataggaacagataattatgtggaggacgacccggtgcca
tgtgcgttcgccggtcatgggcgtcagtgcgcaattaatggctcagagtgtcgggggagg
tgggatggtcccaacggaggaatcaccaacttcgacaacttcttcttcgccatgttgacg
gtgttccagtgcatcaccatggagggctggaccgacgtcctgtactggatgaatgacgcc
atcggcttcgagctgccctgggtctattttgtcagtctggtgattttcggctcgttcttc
gttctgaacctggtcctgggagtcctgagcggagagttcagtaaggagagggagaaggcg
aaggctcggggagatttccagaagctgagggagaagcagcagatggaggaagatctgtgt
ggctacatggactggatcactcaggccgaggacatggacgagctggatgaggacggaaac
ccacgtccgtctttgggagatctgtctgataagaagagagggaagttcggatggttcagt
cactccaatgaaacacacgcgagtcttcctgccagtgaaacagcttctgaaaacactgaa
aacatcgacgaggaacacaccaactgctgccaggcctgctgtgctcgcatgatgaagatc
agctgctgtcggacactgcgtcgctggaatcgtgtctgtcgcaggaactgtcgcactgct
gtgaaatctgtgacgttctattggcttgttctgctgctcgtcttcctcaacacctccctg
agcgcctccgagcactacaaccaacctaactggctgacacaagtccaggacatcgccaac
aaggtcctgctgtctctgttcaccgtggagatgctgctgaagatgtacagtctgggtctg
gctcactacttcgtggccttcttcaaccgcttcgactgcttcgtggtgtgtgggggcatc
atggagaccatcttggtggagctggagatcatgcctcctctgggcatctctgtgctgcgc
tgcgtccgccttctgcggatcttcaaggtcacacgccattggacggctctgtccaatctg
gtggcgtccctgctgaactccatgaagtccatcgcctccctgctgctgctcctcttcctc
ttcctcatcatcttcgctctgctcggcatgcagctgttcggagggaagttcaacttcgac
gagacgcagaccaaacgcagcaccttcgacgccttcccccaggcgctgctcacctgcttc
cagatcctgacgggtgaggactggaacgtggtcatgtatgacggcatcatggcgtacgga
ggccccgtgtttccagggatgatcgtctgtgtttacttcgtcatcctcttcatctgtggt
aactacatcctgctgaacgtcttcttggccatcgctgtggacaacctggccggaggagac
ggagacgacaagaaggaagagaagaaggaggagggagctgtggaggaggaggccgaagaa
ggagaagtggacattgatgcagacactgagtacgaggaggaggaggagcttcctgaagga
gatgaagacggaggggaccagttaaagatggccgaccttgctcctcctaaagagaagatt
cttccaatcccagaaggcagtgctttcttctgcctcagcaaaacaaaccctatccgtgtg
ggatgtcacactctaatccaccaccacatcttcaccaacctcatcctggtcttcatcatc
ctcagcagctgctcgttggctgcagaggatccaatcagagcccactccttcaggaacaac
atcttgggttatgcagactatgccttcacctccatcttcactgtggagatcctgttaaag
atgacggtccatggagcgttcctccatcagggctccttctgcagaaactggttcaacttg
ttggatctactggtcgtcagcgtctcactggtctccttcttcctgcactccagcgcaatc
tcagtggtgaagatcctcagagtcctcagggtgctccgacctctgagagccatcaacaga
gccaaaggactcaagcatgtggtccagtgtgtatttgtggccatcaggacgattggaaac
atcatgatcgtcacgactctgctgcagttcatgttcgcctgcatcggagttcagctcttc
aagggtaaattttatcgctgcacagacgaagccaaacacactcctgaacagtgcaaaggg
acctttgtggtgtataaagatggagacgtgagccacccgatggtcagggagcgtctgtgg
cacaacagtgactttaactttgataacgtgttgatggggatgatggcgctcttcaccgtg
tccaccttcgagggctggcccgctctgctgtacaaagcattgatgcgaaacagggagaac
tcttggccatctacaacttaccggtcgaagatctccatcttcttcatcatctacatcatc
atcatcgccttcttcatgatgaacatctttgtgggtttcgtcatcatcaccttcagagaa
cagggagagcaggagtacaagaactgtgagctggacaagaaccagcgtcagtgtgtggag
tacgctctcaaggctcagccactgaaactttacatcccaaagaatccggttcagtacaaa
ttctggtccatcatcaactccacggggtttgagtacgtcatgttcgtcctaatcctgctc
aacaccgtcactctggctgttcagcactatgaacagtctaaaaccttcagctacatcatg
gacatcctcaacatggtgtttactggactcttcactgtggagatgctgctgaagctgctc
gctctcagactcaggcactactttatcgacgcctggaactcgttcgacgctctaatcgtg
gttggcagcgtcgtcgacatcgtggtcacagagttcagtagtggagaggacagctctcga
gtgtccatcaccttcttccgtctgtttcgagtgatgcgattggtcaagctgctgagtaaa
ggggaggggattcgcacgctgctgtggactttcatcaaatcgctgcaggctctgccgtac
gtcgctctgctcatcgccatgattttcttcatctacgccgtcatcggcatgcagacgttt
gggaagatagcgatgcaggatcacactcagatcaacaggaacaacaacttccagactttc
cctcaggctgttctcctcctcttcaggtgtgctacaggtgaggcgtggcaggagatcatg
ttggccagccttccaggtaaacgctgtgaccccgagtcagactacgaaccaggggaagag
ttcacctgcggcagcaacttcgccatagtttacttcatcagcttcttcatgctgtgtgct
ttcctgatcatcaacctgtttgtcgctgttatcatggacaacttcgactatctgacacgt
gattggtcgattctgggaccacatcatctggacgagtttaaaaggatctggtctgaatac
gacccagaggccaagggtcgcatcaaacacctggacgttgtggctctgctcaggaggatt
cagcctcctctgggttttgggaagctctgtcctcacagagtggcctgtaagcgcctggta
gcgatgaacatgcctctgaacgctgacgggatggtgacctttaacgcaacgctctttgct
ctggttcgcaccgccctcaagatcaagaccgaaggtaaccctgagcaggagaacgaggag
ctgagggggatcatcaagaagatctggaaaagaatgaaaccaaaactactggacgaagtc
ataccaccacacgaagaggaagaagtgacagttgggaagttttacgcaactttcctgatc
caggattatttcaggaagttcaggaagaggaaagagaaaggaactctgcccggagagtct
gacgccaccaacccatctgcaatccagttgtgtaaagccggtctgaagactctgcaggat
ctgggtccagagatgcgtctggctctgaacgaggacctggaggaggaggaggaggccatg
atggaggatgaggagctggaggagaacaccacatacaagggggaaaatggttttggacca
gaaaaagatcgacgaggctccatcctgaccacacccaccggtcctggtggtgttgtcggt
gacggagctgtgtctaatggaggtcttattcaccgggttggttctctcaccaagatgcag
aacggcagcgaaaatgaggaacatctttaccgtggagacaacatgaggtcatctgtcaat
catcatcatcaccgcccatcagtgaagaacggcctgctggaccacgcccaaaagagacca
tcatactacaaacaacatggaaggagggactcaagggacagatactggaggaatggggac
atggaggcgtatggagagcagggttattacagcagagaggaagacaacgacagcatcacc
tccagagacagacattaccctgacgagcctcctctatacagagaccactacgatggacac
gccccctacaccaacagtagctatggtaacggctacagcgatggcaggaggacaacccgc
agacgcctacttcctgccacgcccacaggtcggaaaccatcgtttaacatccagtgtctg
aggaggcaggggagcagtgacgacctgcccatccctgggacgtaccaccccacttctcca
ccacgccgtgcacgtacacagacattcagcagttatgagtctcgtcactcctccgggcgc
tcctcagcggcgtcctcggcgtcctgggcaaacccatgtcctcgccgtggacgcctcctc
tacgctcctcttatcctggtggaggaggaaggcagcccaccctggggagggggaggagga
ggaccagggggtgaggggaagaaggaaggagcaggaagaggtgtcagtgtgacaggtgca
gcacccagaccggcctggtatggtggccctgtggggacatcagcaccgccgccatacaga
gcctacaccaccctcagagttccttctcagctcggagctcagttcactgagaaacgggga
tcagccgacagtctagtggaggcggtcctgatctcggagggtcttggcctttatgcacgg
gatccgaagtttgtggcgtttgcgaagcgagagatcgcagatgcgtgtcacatgacggtg
gatgagatggaatcggctgccagcgacctccttggctcagggagccatggtttccttggc
aatgccgctgccgaccctgctgcgctctacagtgacgaggagccaatcaggacgggtcgt
gatgaagacgagctggccgacgagatgacatgtgtgacatcattttga
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