Seriola dumerili (greater amberjack): 111235951
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Entry
111235951 CDS
T05606
Name
(RefSeq) LOW QUALITY PROTEIN: deformed epidermal autoregulatory factor 1 homolog
KO
K23041
deformed epidermal autoregulatory factor 1
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdu03000
]
111235951
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111235951
Transcription factors [BR:
sdu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
SAND domain-containing proteins
111235951
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
111235951
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAND
zf-MYND
Motif
Other DBs
NCBI-GeneID:
111235951
NCBI-ProteinID:
XP_022620247
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MASVDGQKTGLQARLHSDPALPRCCSVTFGCCRSXGRMDEADSATKALGLDEPPIGGPPV
EGVGSDTESEAEVTTMAVMAEPGNIDMGAESLPNSDEAEAAFAEVTAVTVADVQAAEDNV
FTTTVATSGSLPEHVLSGRTTLQLGEGLSTQKATLIVVHTDGSIVEATGLKSATAIAPGQ
QTTPTPLTPPQDKDSCSKYNWDPSVYNNELPVRCRNTSGVLYKNRLGSGGKGRCIKHNQQ
WFTPTEFEGLAGRASSKDWKRSIRYAGRPLLCLIQERILNPHAASCTCAACCDDLTACPK
DSGETLAAENISMTGPVRLFVPYKRRKKDTDPPLVLPKKELPATKNITLTPGTTFTVSPS
GQFTTAGALTFDRTPSGDATAAAAAAAIISEGSSQSEVFASTAVLTALPALAVTPQPVQA
KLAVTTTPAASPSAGLVSGLEEGPVGGAGPAVSEGQKNTWLYLEELANTLLSNVQQLKAL
IEQAKNSSGDTAGFKGQGGRKECGFSQSFQNQISFQQPDDSEAKRSSDITEIIINQMCVN
CGRVAMSECTGCHKVNYCSTFCQRKDWKDHQHTCCQSAGGVAVQEEEPITAIDMDKVK
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagttgatggacagaagacagggctacaggctcggctgcactcggaccccgct
ctgccccgctgctgctcggtcacattcggctgttgtcgttcgngcggaagaatggacgaa
gcggactcggccacgaaggcgctcgggctggatgaaccgcccatcggcgggccgccggtg
gagggagtgggctcggataccgagtcggaggccgaagtcaccacgatggcggtgatggcg
gaaccgggaaacatcgacatgggagccgagtccctgccgaactcagacgaggccgaggcg
gcatttgcagaggtgacggcggtgacggtggcggacgttcaggctgcagaggacaacgtc
ttcaccacaaccgtcgccacgtcaggaagcctccctgaacacgtgctgagtgggaggaca
accctccagctgggtgaaggtctcagtacccagaaggccactttgattgtggttcacacc
gacggcagcatcgtggaggcgactggcctcaagtctgccaccgccatcgcaccaggtcaa
cagaccacgcccaccccgctgaccccaccccaggacaaagactcctgctctaagtacaac
tgggacccctcagtctacaacaacgagctgccagtccgctgcaggaacaccagtggagtc
ctctacaagaaccgactgggatcagggggtaaaggtcgttgcatcaaacacaatcagcag
tggttcacgcccactgagtttgaaggtctggcaggaagagcgagcagcaaagactggaag
aggagcatcagatacgccggcagacctctgctctgcctcatacaggagcgtatcctgaac
ccccacgctgcctcctgtacctgtgcagcctgctgtgacgacctgacggcgtgtccgaag
gatagtggagagactctggcagcagaaaacatcagtatgaccggtccggtccgcctcttc
gtcccgtacaagagacggaagaaggacacggacccgccgctcgtcctccctaaaaaggaa
cttcctgccaccaaaaacatcacgctgacccctgggaccacattcaccgtgtccccgtca
ggacagttcaccaccgccggagccttgaccttcgaccgcactccgtcaggtgacgccact
gccgccgccgctgccgccgccatcatctcggagggctcgtcgcagagcgaggtgttcgca
agcaccgcagtgctgacagctttgccagcgttggcggtgactcctcagcccgttcaggcc
aagttggcggtgacgacgacgccggcggcgtctccatctgcggggctggtgagcgggctg
gaggaggggccagtagggggggcggggccggcagtgagcgaagggcagaagaacacctgg
ctgtacctggaggagctggccaacacgctgctgagcaacgtgcagcagctgaaggctctg
atcgaacaggccaaaaactcctcaggggacacggcggggttcaaaggtcagggagggagg
aaggagtgtggtttcagtcagtcgtttcagaaccagatttcctttcagcagccagacgac
tctgaggccaagaggagctctgacatcactgagatcatcatcaaccagatgtgtgtgaac
tgtggccgggtggcgatgagtgagtgtacgggctgtcacaaagtcaactactgctccacc
ttctgtcagaggaaggactggaaggaccatcaacacacctgctgtcagtcagcagggggc
gtggccgtccaggaggaggagccaatcacagccatcgacatggacaaagtgaaatga
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