Solanum dulcamara (climbing nightshade): 129880315
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Entry
129880315 CDS
T09577
Name
(RefSeq) threonine--tRNA ligase, mitochondrial 1-like
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
129880315
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdul01007
]
129880315
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdul03016
]
129880315
Enzymes [BR:
sdul01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
129880315
Amino acid related enzymes [BR:
sdul01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
129880315
Transfer RNA biogenesis [BR:
sdul03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
129880315
Prokaryotic type
129880315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
129880315
NCBI-ProteinID:
XP_055810265
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All DBs
Position
2:complement(11072967..11091351)
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AA seq
724 aa
AA seq
DB search
MLLASPVCWRLFTQSIRRPPPCKNFSLLRRCFSSPPPMGKAAKSSEANSSTSIPKDESYL
QNVIPKRIALFESIQNQQRLQRLSLSPDPIKIELVDGTMKEGKKWNTTPLDIAKEISKSL
AGNALIAKVNGVLWDLLRPLEGDCKLEIFKFDSDEGRDTFWHSSAHILGESLERTFGCKL
CIGPCTTRGEGFYYDAFYGDLGLNEDHFIRIKQEAEKAVSEKQPFERIEVSRQQALDMFS
DNRFKVEIIKDLPEDKTITVYRCGPLVDLCRGPHIPNTSFVKALACTKASSAYWRGDKDR
ESLQRVYGISFPDQKQLKEYLAMLAEAKKYDHRELTKKQELFFFHPLSPGSCFFLPHGAR
ICNKLLEFIKSQYWKRGYEEVWSPNMYNMQLWETSGHAANYKENMFLFEIEKQEFGLKPM
NCPGHCLIFDHRVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQ
IKDEVKGVLDFISYVYKIFGFTFDLKLSTRPEKYLGDLESWEKAEAALAEALKEFGKPWE
INEGDGAFYGPKIDITVSDAMKRKFQCATLQLDFQLPQRFNLSYSAEDESKRERPVMIHR
AILGSVERMFAILLEHFKGKWPFWLSPRQAMVCPVSDKSLSYAFELRERIHDAGYYVDVD
TSDRTIQKKVREAQMAQYNYILVVGEAEAGSGQVSVRVRSKPDHEVMTVDSLLTHFKDLV
ATFQ
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgctattggcttcaccagtctgttggcgcctcttcacccaatctatccgccgtcctccg
ccgtgtaagaacttttccctcctccgccgctgcttttcatctccgccaccaatgggaaag
gctgcgaaaagttccgaagctaactctagtacatcaatccccaaagacgaaagttatcta
cagaatgttattcctaaacgtatcgcactcttcgaatctatccagaatcagcaacgactt
caacgactttcactctcccctgatcctatcaagatcgagttagttgatgggacaatgaag
gagggaaagaaatggaatactacaccattggatatagcaaaggagatatcaaagagcttg
gctggaaatgcgttgattgcgaaggtgaacggggtgctttgggatttgttgaggccgttg
gaaggcgattgtaagctagagatctttaaatttgacagtgatgagggccgtgacacattt
tggcactcgagtgctcacattcttggagagtcgttggagaggacatttggatgcaaattg
tgtattggaccatgtacaacaagaggagaggggttctattatgatgccttttatggtgat
ctgggattaaatgaggatcattttatacggattaagcaggaggcagaaaaagctgtttcg
gagaaacaaccttttgaacgcatcgaagtttcacggcaacaagctcttgatatgttctct
gataataggtttaaggttgaaatcattaaggatttacctgaagataaaacaatcacagta
tacagatgtggaccgttggttgatctgtgccgtggtccccatataccgaatacatctttt
gttaaagcactagcctgtacaaaggcttcatcagcatattggagaggagataaggaccgt
gaaagcttgcaaagagtttatggaatatcttttccagaccagaaacagttgaaggaatac
ctagcaatgctggcggaagcaaagaaatacgatcacagagagctgactaagaagcaggag
cttttcttttttcacccattaagccctggaagttgcttctttcttccacatggtgctcga
atttgcaacaaactgctggaattcataaagagtcagtattggaagagaggctacgaggag
gtttggagtccaaatatgtacaatatgcaattgtgggaaacatctggtcatgctgcaaat
tacaaggagaacatgtttttgtttgagattgaaaagcaagaatttgggttgaagccaatg
aattgcccaggtcattgtttgatatttgatcacagagttcgttcttacagggagctacca
cttcgtctggctgactttggagttctacacaggaatgaggccagtggtgcactcactggc
ttaacgcgcgtcaggagattccagcaggatgatgcccacatcttttgcagggagtcacag
attaaggatgaagtcaagggtgtcttagatttcattagctatgtgtataagatatttggt
ttcacttttgacctgaagttatcaacgaggcctgaaaaatatcttggagacttggaaagt
tgggagaaggctgaagctgctcttgcagaagcattgaaggagttcgggaagccatgggag
atcaatgaaggagatggagcattttacggtccaaaaattgatatcactgtttctgatgca
atgaaaaggaaattccagtgtgcaacattgcagcttgatttccaacttcctcaacgattc
aacctatcatactcagcagaagatgaaagtaagagggagagaccagttatgatacataga
gctatacttggatcagttgaacgcatgttcgctattctcttggagcatttcaaggggaaa
tggcctttctggcttagtccacgtcaagcgatggtctgccctgtttcggacaaatctctg
tcgtatgcatttgagctccgggagcggatacatgatgctggttattatgttgatgttgat
accagtgacaggacaatccagaaaaaggtacgagaggctcaaatggcacaatataactat
attctagttgttggagaagcggaagccggtagtgggcaggtgagcgttcgagtgagaagc
aagcctgatcatgaagtcatgacagttgacagcctcctcactcacttcaaagatctggtc
gcaacatttcagtag
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