Solanum dulcamara (climbing nightshade): 129883230
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Entry
129883230 CDS
T09577
Name
(RefSeq) histone deacetylase 19
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03082
ATP-dependent chromatin remodeling
sdul03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129883230
03083 Polycomb repressive complex
129883230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdul03036
]
129883230
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
129883230
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
129883230
HDAC complexes
Sin3A-HDAC complex
129883230
BRAF-HDAC complex
129883230
REST complex
129883230
SHIP complex
129883230
MiDAC complex
129883230
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
129883230
Heterochromatin formation proteins
Other heterochromatin formation proteins
129883230
Chromatin remodeling factors
NuRD complex
129883230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
129883230
NCBI-ProteinID:
XP_055813818
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All DBs
Position
3:complement(79972705..79980656)
Genome browser
AA seq
498 aa
AA seq
DB search
MDVGGNSLASGADGKKRKVSYFYDPEVGNYYYGQGHPMKPHRMRMTHALLAHYGLLQHMH
VLKPNPARDKDLCRFHADDYIAFLRSVTPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHGHCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDIGYGSGKYYSLNVPLDDGI
DDESYQSLFKPIMGKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKYMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGIELEDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNSRQILEDIRSKLLDNLSKLQHAPSVQFQERPPDTELPEADEDQEDADSRWDADSDTNG
EERKPIPSRVRRENVEPEGKDTDDMKTEEHLREVESTFAESTSLKGGNSGSALMDGGQIK
MEQGNSNKPFDQPTDVIS
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggatgttggaggaaactccctagcatctggtgcagatggaaagaagagaaaagtaagt
tatttctatgatcctgaagttggcaattactattatggacaaggacacccaatgaagccg
catagaatgcggatgacacatgctcttcttgcccactatggtctattacaacatatgcat
gttctgaagccaaatcctgctagagataaggatctctgcaggtttcatgctgatgattat
attgctttcttgagaagcgtaacccctgaaacacagcaagatcagctgaggcagctgaag
aggttcaatgttggggaggactgtccagtttttgatggcctttattccttctgccaaacc
tatgctggaggttctgttggtggggcagttaagttaaaccatggacactgtgatatagct
gtaaattgggctggtggattgcatcatgccaagaaatgtgaagcgtctggtttctgctat
gtgaacgatattgtgttggctattttggagctactcaaagtccacgagagggtgttgtat
gtggatattgatatccatcatggtgatggcgtggaagaggccttttatactacagatagg
gtcatgacagtttcctttcataaatttggagattactttcctggtacaggggatgtacgt
gatattggatatggaagtggaaaatactactctcttaatgttccactagatgatggaatt
gatgatgagagctatcagtccctctttaagccaataatgggcaaagtgatggaagttttt
aagcctggtgctgtggtcttacaatgtggtgcagattccttgtctggcgataggctaggc
tgctttaatctctctattaaaggtcatgctgaatgtgtcaaatacatgaggtctttcaat
gtgcctctgttgttgcttggtggaggtggttacacaattcgtaatgttgctcgttgctgg
tgttacgaaacaggagttgcattaggaatagagcttgaagataagatgccacaacatgaa
tattatgaatactttggtccagattataccttgcatgttgctccaagtaacatggagaac
aaaaattctcgtcagattttagaagatataagatcaaagctgcttgataatctttcgaag
cttcagcatgccccaagtgtacagttccaggaacgaccaccggacactgaattgccggag
gctgacgaagatcaagaggatgcagattcaagatgggatgctgattctgacacgaatggc
gaagaacgtaagcccattcctagcagagtgaggagggaaaatgttgagcctgaaggaaaa
gacacggacgatatgaaaacagaggagcacctaagagaagtggagtcgacatttgcagag
tcaacaagtttgaagggtggcaattcaggttctgcactgatggatggaggacagattaaa
atggaacaagggaactctaacaagccttttgatcaaccaacagatgttatttcttga
DBGET
integrated database retrieval system