KEGG   Solanum dulcamara (climbing nightshade): 129883230
Entry
129883230         CDS       T09577                                 
Name
(RefSeq) histone deacetylase 19
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03082  ATP-dependent chromatin remodeling
sdul03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    129883230
   03083 Polycomb repressive complex
    129883230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sdul03036]
    129883230
Enzymes [BR:sdul01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     129883230
Chromosome and associated proteins [BR:sdul03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     129883230
   HDAC complexes
    Sin3A-HDAC complex
     129883230
    BRAF-HDAC complex
     129883230
    REST complex
     129883230
    SHIP complex
     129883230
    MiDAC complex
     129883230
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     129883230
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    129883230
  Chromatin remodeling factors
   NuRD complex
    129883230
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 129883230
NCBI-ProteinID: XP_055813818
LinkDB
Position
3:complement(79972705..79980656)
AA seq 498 aa
MDVGGNSLASGADGKKRKVSYFYDPEVGNYYYGQGHPMKPHRMRMTHALLAHYGLLQHMH
VLKPNPARDKDLCRFHADDYIAFLRSVTPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHGHCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDIGYGSGKYYSLNVPLDDGI
DDESYQSLFKPIMGKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKYMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGIELEDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNSRQILEDIRSKLLDNLSKLQHAPSVQFQERPPDTELPEADEDQEDADSRWDADSDTNG
EERKPIPSRVRRENVEPEGKDTDDMKTEEHLREVESTFAESTSLKGGNSGSALMDGGQIK
MEQGNSNKPFDQPTDVIS
NT seq 1497 nt   +upstreamnt  +downstreamnt
atggatgttggaggaaactccctagcatctggtgcagatggaaagaagagaaaagtaagt
tatttctatgatcctgaagttggcaattactattatggacaaggacacccaatgaagccg
catagaatgcggatgacacatgctcttcttgcccactatggtctattacaacatatgcat
gttctgaagccaaatcctgctagagataaggatctctgcaggtttcatgctgatgattat
attgctttcttgagaagcgtaacccctgaaacacagcaagatcagctgaggcagctgaag
aggttcaatgttggggaggactgtccagtttttgatggcctttattccttctgccaaacc
tatgctggaggttctgttggtggggcagttaagttaaaccatggacactgtgatatagct
gtaaattgggctggtggattgcatcatgccaagaaatgtgaagcgtctggtttctgctat
gtgaacgatattgtgttggctattttggagctactcaaagtccacgagagggtgttgtat
gtggatattgatatccatcatggtgatggcgtggaagaggccttttatactacagatagg
gtcatgacagtttcctttcataaatttggagattactttcctggtacaggggatgtacgt
gatattggatatggaagtggaaaatactactctcttaatgttccactagatgatggaatt
gatgatgagagctatcagtccctctttaagccaataatgggcaaagtgatggaagttttt
aagcctggtgctgtggtcttacaatgtggtgcagattccttgtctggcgataggctaggc
tgctttaatctctctattaaaggtcatgctgaatgtgtcaaatacatgaggtctttcaat
gtgcctctgttgttgcttggtggaggtggttacacaattcgtaatgttgctcgttgctgg
tgttacgaaacaggagttgcattaggaatagagcttgaagataagatgccacaacatgaa
tattatgaatactttggtccagattataccttgcatgttgctccaagtaacatggagaac
aaaaattctcgtcagattttagaagatataagatcaaagctgcttgataatctttcgaag
cttcagcatgccccaagtgtacagttccaggaacgaccaccggacactgaattgccggag
gctgacgaagatcaagaggatgcagattcaagatgggatgctgattctgacacgaatggc
gaagaacgtaagcccattcctagcagagtgaggagggaaaatgttgagcctgaaggaaaa
gacacggacgatatgaaaacagaggagcacctaagagaagtggagtcgacatttgcagag
tcaacaagtttgaagggtggcaattcaggttctgcactgatggatggaggacagattaaa
atggaacaagggaactctaacaagccttttgatcaaccaacagatgttatttcttga

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