Solanum dulcamara (climbing nightshade): 129888725
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Entry
129888725 CDS
T09577
Name
(RefSeq) DNA mismatch repair protein MSH4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdul03036
]
129888725
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Meiosis-specific proteins
Others
129888725
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
Motif
Other DBs
NCBI-GeneID:
129888725
NCBI-ProteinID:
XP_055819682
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Position
5:2098787..2112309
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AA seq
812 aa
AA seq
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MEEDAGERSSFVVGFIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLQFYEPM
VIIVSPNKLAEDGMVGVSQLADRVCPSTKKVIMARGCFDDTRGAVLVKGLAAKELSALGL
DSYYKQYYLCLAAAAATIKWIEAEKGVIITNHSLMVTFNGSFDHMNIDSTSVQNLEIIEP
MHSSLLGSNNKKRSLFHMLKTTRTIGGTRLLRANLLQPLKDIETINTRLDCLDELMSNEQ
LFFGLSQALRKFPKETDRVLCHFCFKPKRVTNDVLASDNGRRSQIMISSIILLKTALDAL
PLLSKVLKEAKSCLLGNVYKTVCENEKYTSIRKRIGEVIDDDVLHTRVPFVARTQQCFAV
KAGADGLLDMARRSFCDTSEAIHSLANKYRQDFKLPNLKIPFNNRQGFYFSISQKDIQGK
LPGKFIQVVKHGNNIHCSSLELASVAILSLLIDAVVFLHSQLNVRNKSAAKECWLRTALC
LEALMDAIREDVSVLTVLSEVLCLLDMMVNSFAHTISTKPVDRYTRARFTCDGPLAIDSG
RHPILESIHNDFIPNGIFLSEASNVAIVMGPNMSGKSTYLQQVCLIVILAQIGCYIPARF
ATLKVVDRIFTRMGTMDSLESNSSTFMTEMTEMAFIMQNVSHRSLIVMDELGRATSSSDG
FAIAWSCCEHLLALKAYSIFATHMESLSALSTMYPNVKILHFDVDVKNNRMDFKFQLKDG
SRHVPHYGLMLAGVAGLPSSVVETAKRITSRITEKEMKRMEVNCRQYEDVQLTYRVAQRL
MCLKYSDQDEDSLREALQNLKESYVGGKALDK
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagacgccggggaaagatcaagcttcgtcgtcggcttcatcgagaaccgagcc
aaggaggttggagtagctgcatttgatttgagatcagcatcactgcatctttctcagtat
atagagactagcagctcctatcaaaatacaaagactttactacagttctatgaacctatg
gtgatcattgtttccccaaataaactggcggaggatggaatggttggggtctcacaacta
gccgatagagtttgtccctccacaaaaaaggttataatggctcgtggttgctttgatgat
accaggggagctgtactggttaaaggtttagctgctaaggaactgtctgctcttggtcta
gactcatactacaagcaatactatttgtgcttggctgcagcagctgcaactatcaagtgg
atcgaagcagagaaaggtgttattattacaaatcactctttgatggttacttttaatgga
tcttttgaccacatgaacattgattccaccagtgttcagaacttggagataattgagcct
atgcattcttctcttctggggtcaaacaacaaaaagagaagtttgttccacatgcttaaa
acaactcgaactattggagggactagacttttgagggcaaatcttttacagcctctgaaa
gacatagagacaattaacactcgactcgattgcctggatgagttgatgagcaatgagcag
ctattctttggcttgtctcaggcccttcgtaagtttccgaaagaaacagacagggtcctt
tgtcacttctgcttcaagccaaagagagttactaatgacgtcttggcttcggataatgga
aggaggagccagattatgatatccagcataattcttctcaaaacagctctcgatgcttta
cccttactctccaaggttcttaaagaagccaagagttgtctgcttggaaatgtgtacaag
accgtatgtgagaatgaaaaatatacttcaataaggaaaagaattggagaggtgattgat
gatgatgtccttcatacacgagttccttttgttgcacggacacagcagtgttttgctgtt
aaggccggagcagatgggcttcttgatatggctcgacgatcattctgtgacaccagtgaa
gctatacacagtctcgcaaataagtatcgtcaagatttcaaactgccgaacttgaagatc
ccattcaataacaggcaagggttttactttagcatttcacagaaggacatacagggaaaa
ctgcccggcaagttcatccaggtcgtgaaacatggaaacaatatccattgctcgagtctt
gaacttgcttcagtggctatcttatctttgctcatagatgcggtggtttttcttcattca
cagttgaatgtgaggaacaagtctgcagctaaagaatgctggttgaggactgcactttgt
ctggaagcattaatggatgcaatacgcgaggatgtctctgtgcttactgttctttccgaa
gttttgtgccttttagacatgatggtaaattcatttgctcacactatatcaacgaaacca
gttgatagatatactagagctcgttttacatgtgatggcccattggcaattgattctgga
cggcaccccattctggaaagcatacacaatgatttcattccaaatggcatctttctttct
gaagcatcaaatgtggctattgtaatgggcccaaacatgagcggaaaaagtacttatctt
cagcaagtttgtttaatagtcatccttgctcaaattggttgctatattcctgctcgattt
gccactttgaaggtggtcgatcgtatttttacaaggatgggaacaatggacagtctcgaa
tcaaactctagcacgttcatgacagagatgacagagatggcttttatcatgcaaaacgtt
tcccatagaagtctgattgttatggatgaattggggagggcaacttcatcctctgatggt
ttcgcaatcgcgtggagctgttgtgagcatctattggcacttaaagcgtactcaatattt
gctacacacatggaaagtctatcagcgctatccaccatgtatccaaatgtgaaaattctt
catttcgatgttgatgtgaagaataaccgcatggacttcaagtttcaacttaaggatggg
tcacgccacgtgccacattacggcctcatgttagcgggggtagctggattaccaagttca
gtagttgagactgccaaaagaatcacatctaggatcacagagaaggaaatgaagagaatg
gaggtgaattgcagacagtatgaggacgtacaattgacttaccgtgtagctcaacggctg
atgtgcttgaaatattctgatcaggatgaagattctttaagggaggctctgcagaacctt
aaggaaagctatgttggtggaaaggctttagataagtag
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